Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5049 ATGGAGCATAATAATAATAACAATAATAATGAGAAAATTCCATCAGCACCAAATGGTAGTAAAAAGCATAAGAAGTCCTCCGGCCTTACATGTTTCGCTCCCCAAGAATGGAACTTAGAAGATGGATCTCAACCCCCCGTCACTTGTTCATTAATGCCGACCCCTCCTCCTATTCCTCTCGCAAAAAAGATAGGAGCTGAGTTTATAGGGACATTGATTCTCATATTTTCTGGGACAGCCACTGCTATTGTGAACCAAAAGACAAATGGGTCCGAGACTCTGATTGGATGTGCTACCTCTAGTGGTCTTGCTGTTATGATCATCATCCTCGCCACCGGCCACATCTCTGGTGCTCATCTCAACCCTGCGGTCACCATTTCCTTTGCTGCATTAAGGCACTTCCCGTGGAAGCATGTGCCTATGTATATTGGTGCACAAGTTATGGCATCAATATGTGCTGCATATACTCTCAGAGAAGTTTTTAACCCTATCATGAGTGGTGGAGTCACCGTTCCTACCGGAGGATATGGCCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTTATTCTCATGTTTGTTGTTACTGCAGTGGCCACCGACACAAGAGCTGTAGGAGAACTAGCAGGGATCGCGGTGGGAGCAACTGTGGTACTAAATATACTCATAGCAGGGCCAATAACAGGAGCGTCAATGAACCCGGTTAGAACTCTAGGTCCAGCTATTGTTACAAACAACTACAAAGACATATCGGTCTATCTAGTAGCTCCCATACTTGGAGCTCTAGCTGGGGCAGGTGCCTATACTGCAGTCAAGCTGCCTGAAGAAGATGATGTTAATGCAAAGACTAATATTTTTTCAAACCACCCCAGCTTCAGATCAAACCAACCCAGCTTCAGAAGTTGA 903 0.4474 MEHNNNNNNNEKIPSAPNGSKKHKKSSGLTCFAPQEWNLEDGSQPPVTCSLMPTPPPIPLAKKIGAEFIGTLILIFSGTATAIVNQKTNGSETLIGCATSSGLAVMIIILATGHISGAHLNPAVTISFAALRHFPWKHVPMYIGAQVMASICAAYTLREVFNPIMSGGVTVPTGGYGQAFALEFIISFILMFVVTAVATDTRAVGELAGIAVGATVVLNILIAGPITGASMNPVRTLGPAIVTNNYKDISVYLVAPILGALAGAGAYTAVKLPEEDDVNAKTNIFSNHPSFRSNQPSFRS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5049 300 Gene3D Glycerol uptake facilitator protein. 56 284 IPR023271 -
Tpr7g5049 300 PRINTS Major intrinsic protein family signature 62 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5049 300 PRINTS Major intrinsic protein family signature 101 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5049 300 PRINTS Major intrinsic protein family signature 138 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5049 300 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5049 300 PRINTS Major intrinsic protein family signature 213 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5049 300 PRINTS Major intrinsic protein family signature 250 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5049 300 PANTHER AQUAPORIN NIP2-1 30 281 IPR034294 -
Tpr7g5049 300 CDD MIP 62 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5049 300 MobiDBLite consensus disorder prediction 1 25 - -
Tpr7g5049 300 MobiDBLite consensus disorder prediction 1 27 - -
Tpr7g5049 300 Pfam Major intrinsic protein 61 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5049 300 SUPERFAMILY Aquaporin-like 59 279 IPR023271 -
Tpr7g5049 300 PANTHER BNAA02G36290D PROTEIN 30 281 - -
Tpr7g5049 300 ProSitePatterns MIP family signature. 119 127 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5049 Tpr-Chr7 58062141 58063852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5049 1 287 Major Intrinsic Protein MIP AT1G80760 70.486 4.85e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5049 K09874 - gmx:100815637 400.979