Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5019 ATGGCTTTTTGCCCACTTTTTTGTTGTGGAATTGCTTCGGATCGCAAAGGAAGTGGGAAGAAACAACCTCCGTGGCGGGTGTTTTCTTTGAAGGAATTACACTCAGCGACAAATAATTTCAACTATGATAACAAGCTTGGAGAAGGAGGATTCGGAAGTGTTTACTGGGGCCAGCTTTGGGATGGATCGCAAATTGCAGTGAAAAGATTGAAGGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGGCACAAGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGCCAGGAACGTCTAATTGTATATGACTATATGCCAAATTTGAGCCTACTTTCTCATCTCCACGGACAGCACTCGACAGAAAGCCTCCTTGATTGGAATCGTCGGATGAATATTGCAATTGGGTCTGCTGAGGGAATTTTATATCTTCACGTCCAAGCAACACCGCATATCATCCATAGGGACGTTAAAGCAAGCAATGTGTTGCTGGATTCAGATTTCCAAGCACGTGTTGCTGATTTTGGTTTTGCCAAATTGATCCCCGACGGGGCAACACATGTGACTACTAGAGTTAAAGGCACCCTTGGCTACCTTGCACCAGAATATGCTATGTTAGGTAAAGCAAATGAGAGTTGCGATGTCTACAGTTTTGGAATTCTCCTTCTAGAACTTGCTAGCGGCAAAAAACCACTCGAAAAACTAAGCTCGTCAGTGAAACGGTCAATTAATGATTGGGCTCTACCATTAGCTTGTGAGAAAAAATTTAGCGAACTTGCAGATCCAAGACTTAATGGTGACTATTCTGAAGAAGAGCTTAAAAGGGTTGTATTAGTTGCTCTAATATGTGCTCAGAGTCAGCCGGAGAAGAGACCAACGATGCTCGAGGTGGTAGAGCTACTGAAGGGAGAATCAAAAGAGAAGGTTTCTCAGTTGGAGAATAATGAACTCTTTAAGAACCCTCTTGCTGTCGGAAATAACAATGATGAGATATCAGCTGCTGAAGGGAGTTCAGATTTCATCTCAGAAGAGAAGGAATCTAAACATGAGAATGCAGAATCTTGA 1095 0.4265 MAFCPLFCCGIASDRKGSGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSTESLLDWNRRMNIAIGSAEGILYLHVQATPHIIHRDVKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSSVKRSINDWALPLACEKKFSELADPRLNGDYSEEELKRVVLVALICAQSQPEKRPTMLEVVELLKGESKEKVSQLENNELFKNPLAVGNNNDEISAAEGSSDFISEEKESKHENAES* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5019 364 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Tpr7g5019 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Tpr7g5019 364 PANTHER OS01G0750732 PROTEIN 1 361 - -
Tpr7g5019 364 Gene3D Phosphorylase Kinase; domain 1 12 115 - -
Tpr7g5019 364 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g5019 364 PANTHER BNAA05G14800D PROTEIN 1 361 - -
Tpr7g5019 364 Coils Coil 305 325 - -
Tpr7g5019 364 MobiDBLite consensus disorder prediction 349 364 - -
Tpr7g5019 364 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g5019 364 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Tpr7g5019 364 MobiDBLite consensus disorder prediction 333 364 - -
Tpr7g5019 364 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Tpr7g5019 364 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g5019 364 CDD STKc_IRAK 46 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5019 Tpr-Chr7 57811633 57815407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5019 28 314 Trihelix Transcription Factor Family AT1G70460 50.515 1.22e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Tpr7g5019 Pkinase 3.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5019 - - gmx:100788153 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g5019 7 57811633 57815407 Tpr7g5019 7 57811633 57815407 ECH
Tpr7g5019 7 57811633 57815407 Tpr4g0525 4 4990581 4991867 PCT