Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5016 ATGCAAGAAATATCTAAATCACCATCTCGTGAAGGAGAAAACAAAGAATCTGAAATTTATGATGATAAGTTAGATTCAAATATTGTTTGCGAAGAAGAAGCACCTAGGACTGCAATGACATTTAGTTCTGAAGAGGAAGTTACCTTGTATTATATGAATTATGCTCGACATATGGGTTTTGGAATTAGTAAAATAAGTTCGAAAAATGGAGATGAAGGAAAAAAATATTTTACTTTAGCATGTAGTCGTGCAGGAAAGTATGTGAGCAATCCCAAGAATGTTTTGAAACCAAATCCTATCACTAAAACACAATGTAAGGCAAGACTGAATGCATGTATATGCTCGGATGGAACAGTTGTTGTTTCAAGTGTTATTCTTGAGCATAATCATGAACTTAGTCCAACCAAAGCACGGTATTTTAGATGCAACAAGAATTTGGGGTCTCATATAAAAAGGAGATTAGAACTTAATGACCAGGCAGGAATCAATGTGAGCAGAAATTTTAGGTCTCTGGTTGTTGAAGCAAATGGGTACGAGAATCTAACATTTGGAGAAAGAGATTGTCGAAATTATATAGATAAGGTAAGACGTCTACGACTTGGGACAGGAGACGCTGATGCAGTACAAAACTATTTTATTAGAATGCAAAAGCAAAATAATCAGTTTTATTATGTAATGGATTTCGATGATGAAAGTCGTTTGAGAAATGTATTCTGGGCAGATGCGAGAAGTAGGGCTGCATATGAATATTTTGGTGAAGCTGTAACCTTTGACACCACTTATTTAACAAACAGATATGACATGCCTTTTGCTCCTTTTGTTGGAGTAAATCATCACGGTCAATCTGTGTTGTTGGGTTGTGCGCTATTATCAAATGAGGATGCTAAAACTTTTACTTGGTTGTTTACAACGTGGCTAGAGTGCATGCATCAACGTGCACCAAATGCCATTATTACTGACCAGGATAAAGCAATGAAAAATGCAATTGAAATTGTCTTTCCAAAAGCTCATCATCGATGGTGTTTATGGCATATAATGAAAAAGATTCCAGAAAAGTTTGGCAGGCACACATATTATGAGTCTATTAAAACACTTTTGCATGATGTTGTTTATGATTCATTGAGTAAAAGTGTTTTCATGGAGAAATGGGAAAGAATGGTTGAATCTTATGAACTACATGATAATGAATGGTTGAAAGGGTTATTTGATGAGCGGCACCGTTGGGTTCCTGTGTATGTGAAGGACACATTTTGGGCCGGGATGTCAACCACACAAAGAAGTGAAAGCATGAACTCATTTTTTGATGGGTATGTAAACTCAAAGACATCACTGAAGCAATTTGTGGAGCAATATGACAATGCATTAAAAGATAAGATTGAAAAGGAAAGCACTGCTGATTTCAATTCATTTAATAAAGTAATTCCATGTTTAAGTCATTTTGGCTTTGAGTCTCAATTTCAAAAAGCATTTACTAATGCAAAATTTAAAGAATTTCAACTAGAGGTTCCTGCTATGATGTATTGA 1524 0.3517 MQEISKSPSREGENKESEIYDDKLDSNIVCEEEAPRTAMTFSSEEEVTLYYMNYARHMGFGISKISSKNGDEGKKYFTLACSRAGKYVSNPKNVLKPNPITKTQCKARLNACICSDGTVVVSSVILEHNHELSPTKARYFRCNKNLGSHIKRRLELNDQAGINVSRNFRSLVVEANGYENLTFGERDCRNYIDKVRRLRLGTGDADAVQNYFIRMQKQNNQFYYVMDFDDESRLRNVFWADARSRAAYEYFGEAVTFDTTYLTNRYDMPFAPFVGVNHHGQSVLLGCALLSNEDAKTFTWLFTTWLECMHQRAPNAIITDQDKAMKNAIEIVFPKAHHRWCLWHIMKKIPEKFGRHTYYESIKTLLHDVVYDSLSKSVFMEKWERMVESYELHDNEWLKGLFDERHRWVPVYVKDTFWAGMSTTQRSESMNSFFDGYVNSKTSLKQFVEQYDNALKDKIEKESTADFNSFNKVIPCLSHFGFESQFQKAFTNAKFKEFQLEVPAMMY* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5016 507 PANTHER OS03G0843700 PROTEIN 12 507 - -
Tpr7g5016 507 Pfam FAR1 DNA-binding domain 50 133 IPR004330 -
Tpr7g5016 507 Pfam MULE transposase domain 255 348 IPR018289 -
Tpr7g5016 507 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 507 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5016 Tpr-Chr7 57788633 57792756 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g5016 MULE 3.7e-37 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5016 - - cam:101506732 783.482