Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4977 ATGGAAGCTGAAAGGTACTCTGCAAAGTTCAAAACCCAGCTATGCATAAAATTCATGCAAGGAACTTGTGCTCATGGAGCAAATTGCAACTATGCACATGGCTACTCTGAAATCAGAGAAACACCAAGACTCTGCAGAATGTTCTCAAGCAACAGACATTGCAACTTTGGAAACAACTGTCGTTTCATCCATTCAACTCCTCATCATCATGATTCTGCTATCATCAACATCACTCCACAACAACAACAAGGGACAGTGCAGAATGCAGGATGCAGGACCATGCAAACTGCTGGTCCTCCTGCTGCAATTAACTTTGGTTCGTCTTCTGCACAAAACAAGATGGTGCAAACTTCTACTGTTCCTGCTACAAATGATCCAGCTAGCAGTAGCACCGTGCCCACAACCAAGTTGCATAAGAATGGACCCTATGCTGGTATATCCAAGTTCGACAAAACGGTCATGCAAAAGGTCATTGGTAAATATGCTGATTGGATTTAA 498 0.4297 MEAERYSAKFKTQLCIKFMQGTCAHGANCNYAHGYSEIRETPRLCRMFSSNRHCNFGNNCRFIHSTPHHHDSAIINITPQQQQGTVQNAGCRTMQTAGPPAAINFGSSSAQNKMVQTSTVPATNDPASSSTVPTTKLHKNGPYAGISKFDKTVMQKVIGKYADWI* 166
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4977 165 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 10 34 IPR000571 GO:0046872
Tpr7g4977 165 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 42 65 IPR000571 GO:0046872
Tpr7g4977 165 Gene3D - 4 41 - -
Tpr7g4977 165 Gene3D - 42 68 - -
Tpr7g4977 165 PANTHER CCCH ZINC FINGER/TIS11-RELATED 6 164 IPR045877 GO:0003729
Tpr7g4977 165 SUPERFAMILY CCCH zinc finger 8 40 IPR036855 GO:0046872
Tpr7g4977 165 SMART c3hfinal6 9 35 IPR000571 GO:0046872
Tpr7g4977 165 SMART c3hfinal6 41 66 IPR000571 GO:0046872
Tpr7g4977 165 SUPERFAMILY CCCH zinc finger 42 66 IPR036855 GO:0046872
Tpr7g4977 165 ProSiteProfiles Zinc finger C3H1-type profile. 9 36 IPR000571 GO:0046872
Tpr7g4977 165 PANTHER ZINC FINGER C-X8-C-X5-C-X3-H TYPE FAMILY PROTEIN 6 164 - -
Tpr7g4977 165 ProSiteProfiles Zinc finger C3H1-type profile. 39 67 IPR000571 GO:0046872
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4977 11 80 C3H Transcription Factor Family AT1G68200 33.333 1.63e-08 50.8
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr7g4977 zf-CCCH 5e-06 CL0537
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4977 - K18753 mtr:MTR_2g103290 157.918