Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4970 ATGGAGAGCGTAAAAATACCTTTCAATGGTATTGTAAACGATTTTAGGGGAAGAAGAGTGCACTATAAAGATGATTGGATTTCTGGTCTCACTTCAGGAATAGGGATATTGGCACCAACTACGTATATTTTCTTTGCTTCTGCTTTACCTGTTATTGCTTTCGGCGCGCAACTTAGTAGGGACACAGATGGAAGTTTGAGCACTGTAGAAACATTGGCTTCTACAGCCATTTGTGGAATCATACACTCCATTTTTGGTGGACAGCCTCTGCTAGTACTTGGAGTGGCAGAACCTACTATCCTTATGTACACCTATTTGTACAATTATGCCAAAAATAAGGAAGGATTAGGGAGAGAACTCTTTTTGGCTTGGGTAGGATGGGTTTGTGTATGGACTGCTCTATTGCTATTTCTTCTAGCAATATTCAATGCTGCCGTTATCATCAATAGATTTACGAGGATTGCTGGTGAGCTTTTTGGCATGTTGATCACAGTCTTATTCATTCAACAGGCAATCAAGGGAATGGTAACTGAGTTTCAAGTTCCTAAAGAGGAGGATCCAACATTGGAAAAGTTCCAATTTCATTGGCTCTATGCAAATGGATTACTTGGTGTTATATTCACCTTTGGCCTTCTCTATACTTCTCTAAAAAGCAGAAGAGCAAGATCATGGTTATATGGAACAGAATGGTTAAGAAGTTTCATAGCAGATTATGGAGTACCATTCATGGTAGTTGTGTGGACAATTTTATCATTCGCAGTAGTAACAAGTAAAGTTCCTTCGGGAGTTCCGAGAAGACTCATTGCACCTGTAGCTTGGGAATCTACATCATTACATCACTGGACAGTGATCAAAGATATGGGGAAGGTTTCTCCAACACACATTTTTGAGGCTTTTATTCCTGCTATAATGATAGCAGGACTTTACTTCTTTGACCATAGTGTTGCATCCCAATTGGCACAACAAAAGGAATTCAATCTCAAAAAACCTTCTGCATATCACTATGACATATTGTTGCTAGGATTCATGACTTTGCTTTGTGGACTAATTGGCCTGCCTCCTTCAAATGGAGTTCTGCCTCAATCCCCTATGCACACCAAGAGTCTAGCTGTTCTCAAGAAACAGTTAATCCGAAGAAAGATGGTTAAAAGTGCAAAGGAAAGCATAAGGCTGAAAGCTAGCAATTCTGAAATATATGGAAAGATGCAAGAAGTGTTTATAGAAATGGATAATAATCCTAATAATAATTCAGTGGTAAAAGAACTAGAGGATTTGAAAGATGTTGTCCTAAATGGTGAAGATAAAGGAGACAACAATAAGAACACATTTGATCCTGAGAAACACATTGATACATATTTGCCTGTAAGAGTAAAAGAGCAAAGAGTGAGCAACCTTTTACAATCACTCTTTGTAGGAGGAGCAGTGTTTGCTATGCCTGCCATAAAAATGATACCAACTTCAGTCTTGTGGGGATACTTTGCTTACATGGCTATTGATAGTCTTCCAGGAAATCAATTCTGGGAAAGGATATTGCTTCTTTTTGTAAGACCTAGTAGGTGGTACAAGTTATTGGAAGGTGATCATGCTTCCTTTGTTGAGTCAGTACCTTTCAGATACATAGTCTTGTTTACACTCTTCCAATGTGTGTATTTCTTGATTTGTTTTGGAGTGACATGGATTCCCATTGCTGGAATGTTGTTCCCTTTGCCTTTCTTTTTGTTGATCACATTGAGACAACATATACTCCCCAAGATATTCAGTCCAAACCATCTTAGGGAATTAGATGCAGCTGAATATGAAGAAAGACCTGGTGCTCCAAGACTTAGTTTCAATCTATCCTACAAGGATGAATCATCTAAAGCTGGATCAGAGGAAATAGATGATGCTGAAATGTTAGATGAGTTAACCACTAATAGAGGAGAGTTGAAGGTTAGAAGTAGTAACTCTACAGAGGAAAGAAATTATCAGGTTTATCCTGATGAAATTGATTCACACTCGGAAAGAGATACTCTGAGGTGA 2019 0.3848 MESVKIPFNGIVNDFRGRRVHYKDDWISGLTSGIGILAPTTYIFFASALPVIAFGAQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLVLGVAEPTILMYTYLYNYAKNKEGLGRELFLAWVGWVCVWTALLLFLLAIFNAAVIINRFTRIAGELFGMLITVLFIQQAIKGMVTEFQVPKEEDPTLEKFQFHWLYANGLLGVIFTFGLLYTSLKSRRARSWLYGTEWLRSFIADYGVPFMVVVWTILSFAVVTSKVPSGVPRRLIAPVAWESTSLHHWTVIKDMGKVSPTHIFEAFIPAIMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESIRLKASNSEIYGKMQEVFIEMDNNPNNNSVVKELEDLKDVVLNGEDKGDNNKNTFDPEKHIDTYLPVRVKEQRVSNLLQSLFVGGAVFAMPAIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVRPSRWYKLLEGDHASFVESVPFRYIVLFTLFQCVYFLICFGVTWIPIAGMLFPLPFFLLITLRQHILPKIFSPNHLRELDAAEYEERPGAPRLSFNLSYKDESSKAGSEEIDDAEMLDELTTNRGELKVRSSNSTEERNYQVYPDEIDSHSERDTLR* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4970 672 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Tpr7g4970 672 Pfam HCO3- transporter family 455 545 IPR011531 GO:0006820|GO:0016021
Tpr7g4970 672 Pfam HCO3- transporter family 200 375 IPR011531 GO:0006820|GO:0016021
Tpr7g4970 672 PANTHER BORON TRANSPORTER 4-RELATED 1 662 - -
Tpr7g4970 672 PANTHER ANION EXCHANGE PROTEIN 1 662 IPR003020 GO:0005452|GO:0006820|GO:0016020
Tpr7g4970 672 MobiDBLite consensus disorder prediction 640 672 - -
Tpr7g4970 672 MobiDBLite consensus disorder prediction 656 672 - -
Tpr7g4970 672 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4970 Tpr-Chr7 57491514 57496064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4970 1 669 Antiporters AT1G74810 69.139 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4970 K24194 - gmx:100811184 1117.83