Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4958 ATGAGGAAGAGTGTCACTTTGAGTGCTAGAGAGGTCCCAACTCGACTGACTCGTGCTCGCGCTGCCGCTTTAAGTGCAACTGGACAGTTGCCACCATTGAAGGATGCAAGACAAGAAACTCAGAAGCATCCCCTAAGAGCCAATTCAAAAAGAGCAGTTTCGGATGATACATGTCTTCCGCATAAGAAGAGGGCAATTCTTCAGGATGTTACTAACATTAGCTGTGAAGTTCAGGCTAAGAAACGCAAGCTGGCCAAGCCTGCTCAACCACCAGTTGCTATAGAGATACCACAATTTGTAGCTGACTCAAAACCGGTGAGTTCAACGGAAATGCGGCTTAGGTCATCAGAAGATATAATGTGCTTAGTTAGTAGGTCGGAAGACAATGCACTTGTTAGAGGCACAAATAATAATCTGCTTCACAGTCAGACATCTCGAATATCTACTCTGCCTTTGATTTCTCAAAATAAAGCTTCACAAACTTTTGCATCCAAGAAAGGCAGCTATTCTGAAATTTTGGATGTGGCGAAGCATCCAGATGTTGCTGACATAGACGCTGATTTTGAAGATCCTCAACTTTGCAGCCTCTATGCTGCTGATATATATGATCACTATCGTGTTGCTGAGCTGTCGAGAAGGCCTTATCCTAGCTTCATGGAAACAGTACAGCAAGATATCACTCCAAGCATGCGTGCGATACTCGTGGATTGGCTTGTTGAGGTTTCTGAGGGATACAAATTGCAAGCAAACACTCTTTACCTCACTGTATATCTCATCGATTGGTTTCTCTCCAAAAATCACATTGAAAGACAGAGGCTTCAGCTGCTTGGCATCACTTGCATGCTAATTGCTTCGAAGTACGAAGAAATTAACGCTCCTCGTGTTGAAGACTTCTGCTTCATTACAGAGAACACATACACAAAAGATGAGGTACTGAAAATGGAGTCTCTAGTGTTGAAATCCTCTGCATATCAACTGTTTGCTCCAACTACAAAAACTTTCTTGAGGAGGTTTCTTCGAGCGGCACAAGCTACTTACAAGAGACCTAGCATTGAATTGGAGTACTTGGCAAATTTCCTAGCTGAACTAACACTTATGAACTATGGTTTCTTAAATTTCCTTCCTTCTATGATTGCTGCATCTGCTGTGTTTCTCGCAAGATGGACGTTAGACCCGTCAAACCATCCATGGAATCCAACTCTTGAGCATTATGCCTCTTACAAAGCACCAGATTTGAAAGCCACAGTTCTTGCATTACAAGATCTGCAGCTGAATAACAATGAATGTCCTTTAACTGCGATCCGCATGAAGTATTCACAAGACAAGCTCAAATGTGTAGCAGCTTTATCTTCAACAAAACTACTTGAAACAATGTTCTGA 1380 0.4232 MRKSVTLSAREVPTRLTRARAAALSATGQLPPLKDARQETQKHPLRANSKRAVSDDTCLPHKKRAILQDVTNISCEVQAKKRKLAKPAQPPVAIEIPQFVADSKPVSSTEMRLRSSEDIMCLVSRSEDNALVRGTNNNLLHSQTSRISTLPLISQNKASQTFASKKGSYSEILDVAKHPDVADIDADFEDPQLCSLYAADIYDHYRVAELSRRPYPSFMETVQQDITPSMRAILVDWLVEVSEGYKLQANTLYLTVYLIDWFLSKNHIERQRLQLLGITCMLIASKYEEINAPRVEDFCFITENTYTKDEVLKMESLVLKSSAYQLFAPTTKTFLRRFLRAAQATYKRPSIELEYLANFLAELTLMNYGFLNFLPSMIAASAVFLARWTLDPSNHPWNPTLEHYASYKAPDLKATVLALQDLQLNNNECPLTAIRMKYSQDKLKCVAALSSTKLLETMF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4958 459 Gene3D - 214 327 - -
Tpr7g4958 459 MobiDBLite consensus disorder prediction 24 55 - -
Tpr7g4958 459 Pfam Cyclin, N-terminal domain 200 321 IPR006671 -
Tpr7g4958 459 SMART cyclin_7 333 421 IPR013763 -
Tpr7g4958 459 SMART cyclin_7 236 320 IPR013763 -
Tpr7g4958 459 PANTHER CYCLINS 44 459 IPR039361 -
Tpr7g4958 459 SUPERFAMILY Cyclin-like 329 452 IPR036915 -
Tpr7g4958 459 SUPERFAMILY Cyclin-like 189 321 IPR036915 -
Tpr7g4958 459 CDD CYCLIN 329 407 IPR013763 -
Tpr7g4958 459 Gene3D - 200 448 - -
Tpr7g4958 459 MobiDBLite consensus disorder prediction 36 55 - -
Tpr7g4958 459 SMART Cyclin_C_2 329 452 IPR004367 -
Tpr7g4958 459 Pfam Cyclin, C-terminal domain 329 451 IPR004367 -
Tpr7g4958 459 PANTHER CYCLIN-A2-4 44 459 - -
Tpr7g4958 459 PIRSF Cyclin_A_B_D_E 2 458 IPR039361 -
Tpr7g4958 459 CDD CYCLIN 230 319 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4958 Tpr-Chr7 57362531 57367435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4958 1 459 Core Cell Cycle Gene Families AT1G80370 51.163 4.23e-154 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4958 K06627 - mtr:MTR_2g102550 587.03