Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4942 ATGGATGACATTGAGGATGATTCAATTGGAAGTTATCCTCCAAACCCTAACAATCATGGTTATGGTTATATGAAACATCCTTTGAGGAATTCTTCATATTCCCATCCGGTTGCGAATGAATCTTCCCGAGATTATAATGATGTTGTTGCTGTTGCTGTTGATGATGACGATGATGTTGTTGAAGATGAAGACCGGTTAGGAGGGGAAGATGATATTGTTGATGTTGTTGATGATGATGTTGATCGAAATAGAAGTGTTCAAAATTCCTTGAACCGGGTTGATGAAGATGTTGACATGGATGGAGATGGGGATGGGGATGAAAATGATGATAACAATAGTGACGATAATGACCAACAACAGAATGAGGAATATGGTTATGTGAAACGTCATGAGAGAAATTCTCCATATTCTCAGTCATTTGCAAATGAAGGTAACAATGATGAGGATGAAGAAGATGAAGAGCGGTTAGTGGAGGAAGAATATGGTGGTGATGATGATGATGATGTTGATCAAATTAATAATGTTCAGCTTTCTCTAAAGCAAGTCGATGAAGAAGATAACTATGATGAGGATGGGGATAGGGATGAAAATGACGATGACAACGACAATGACGGTGATAATGACGATAAGGAGAAAAGTTATGCCATTATGAATAATGAAGATGAATTTGAGTGGCACCCAAAAAAGCAAAAGCTGAAGAGTTTGATTTCAACCTATGAATTCGCAGCTCGGGTGCCGACACCATCAGCTGTAGCTACTTCAGCTACTAAACCGTCTTTTAGGGTTAGAAATTCCCTTACTGAGTGGACTGAGAAGGAGACATTTATTCTTCTTGATGCGTGGGGTGATCGGTTTCTTCAACATGGAAGGAAGAGTCTTCGATCTGATGAATGGCAACAAGTTGCAGAAAAGGTATCAGAAGTTTCAAGAGTTGAAAGAACAGGTACTCAGTGTAGAAATCGTTTAGATACATTGAAGAAAAAATACAAAAAGGACAAGATTAAGTTTTCAGAAATGGGTGGCGGAGATAAAAAATGGGTTTATTTCAAGAAGATGGATAAGCTAATGTCTTCTCCACCACAACAGGCAGGTTTCTCTTGTGGTTTGGACTCAAGAGAGAGTGTTTTCATGAAGCCGAGAGTTTATGTAAATCATGCAAATGGGTTGGATGACATGAAAGATAGTCCTGAGAATACTGAATCCATCGGTGTAGAAAGTTCAGATGGACCTCGCACAAAGAAAAGAAGGAAGGGAAAGAGCGATGATAACGATTATTCTTTCAAATTACTTGCTGATTCCATTCAGAATTTTGGTAAGATATATGAGAAGATTGAAAATAGTAAAAGGCAGCAGATGCTGGAACTGGAAAAGATGAGGATGGAATTTCTCAATGATTTGGAAATACAAAAGAGACAGATTTTTGAAAAATTGCAGAGTGAGATTTTGAAACTAGAGCAAAGAGATGATTAG 1470 0.381 MDDIEDDSIGSYPPNPNNHGYGYMKHPLRNSSYSHPVANESSRDYNDVVAVAVDDDDDVVEDEDRLGGEDDIVDVVDDDVDRNRSVQNSLNRVDEDVDMDGDGDGDENDDNNSDDNDQQQNEEYGYVKRHERNSPYSQSFANEGNNDEDEEDEERLVEEEYGGDDDDDVDQINNVQLSLKQVDEEDNYDEDGDRDENDDDNDNDGDNDDKEKSYAIMNNEDEFEWHPKKQKLKSLISTYEFAARVPTPSAVATSATKPSFRVRNSLTEWTEKETFILLDAWGDRFLQHGRKSLRSDEWQQVAEKVSEVSRVERTGTQCRNRLDTLKKKYKKDKIKFSEMGGGDKKWVYFKKMDKLMSSPPQQAGFSCGLDSRESVFMKPRVYVNHANGLDDMKDSPENTESIGVESSDGPRTKKRRKGKSDDNDYSFKLLADSIQNFGKIYEKIENSKRQQMLELEKMRMEFLNDLEIQKRQIFEKLQSEILKLEQRDD* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4942 489 MobiDBLite consensus disorder prediction 207 222 - -
Tpr7g4942 489 MobiDBLite consensus disorder prediction 1 222 - -
Tpr7g4942 489 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 145 489 IPR044823 -
Tpr7g4942 489 MobiDBLite consensus disorder prediction 51 76 - -
Tpr7g4942 489 MobiDBLite consensus disorder prediction 77 96 - -
Tpr7g4942 489 MobiDBLite consensus disorder prediction 184 206 - -
Tpr7g4942 489 Coils Coil 441 461 - -
Tpr7g4942 489 Pfam Myb/SANT-like DNA-binding domain 268 355 IPR044822 -
Tpr7g4942 489 MobiDBLite consensus disorder prediction 144 171 - -
Tpr7g4942 489 MobiDBLite consensus disorder prediction 97 117 - -
Tpr7g4942 489 Gene3D - 269 331 - -
Tpr7g4942 489 ProSiteProfiles Myb-like domain profile. 269 326 IPR001005 -
Tpr7g4942 489 MobiDBLite consensus disorder prediction 387 420 - -
Tpr7g4942 489 PANTHER OS01G0718900 PROTEIN 145 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4942 Tpr-Chr7 57187422 57189668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4942 411 487 Trihelix Transcription Factor Family AT3G14180 41.558 1.24e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr7g4942 Myb_DNA-bind_4 7.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4942 - - mtr:MTR_2g102227 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4942 7 57187422 57189668 Tpr7g4942 7 57187422 57189668 ECH