Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4932 ATGCCTTTTCCAGGTTGTAGGAGTTTAAAAAAACACATTTCAAAACACAGGAAAAATAATTTGAAGAAAAAGAGAATGGAGTTTTGGAGAGAATATGTTGTGAAGAACAATGTGGGCAGAGAGTTTGTAGCGGGTGGATTTGGTGGCACGGCCGGTATCATCACGAGTTATCCATTCGATACTCTTCGTGTCATGCAACAACAGTCCGGCAACGCCTCTGCCATCGGCATCCTCAAAAATTTGTTGGCTAAGGATGGACCAACTGCTCTCTACCGTGGCATGGCGGTTCCTTTGGCCTCAGTTGGTTTTCAAAATGCTATGATTTTTCAAAGTTATACAATTTTCACAAGGATTTGTAGCCCTTCAAATTCTTCCAATGGACCTCCTTCCCTCACAAATGTTGCTTTAGGAGGACTTGGTGCCGGTGCTCTCCAAAGTATTTTAATATGCCCTGTTGAGCTTGTTAAAATCCGCATGCAACTGCAGAAAAATATAGACTATTTTTCGAAAAACAAAAGGATCACTCCAATGAATCTGGCTAAGAGCATTTGGAAAAATGAGGGCATCCGCGGCATTTATCGAGGATTTGGCATCACCGTTCTTAGAGATGCACCTGCACATGCCTTCTACTTTGGGACATATGAGTACTTGAGGGAGAAACTTCACCCTGGTTGTAGAGAAAATTGTCAAGAAAGTGTGAGTACTATGTTTATAGCTGGAGGATTAGCTGGAATTTCAAGTTGGATTTTCAACTACCCTACAGATGTTATAAAGACAAGATTGCAAGCTCAAACATCTTCTTCAATGAAATACAAAGGTATCTTAGATTGTACCTTAAAGATAATTAAAGAAGAAGGTTCTATTGTGCTATGGAGGGGTTTAGGAGCTACAATTGCTAGAGCCTTTGTTATGAGTAGTGCAATATTTCCAGTTTATCAAATTGCTCTAAGGTGTTTCACCAACAACTAA 969 0.4014 MPFPGCRSLKKHISKHRKNNLKKKRMEFWREYVVKNNVGREFVAGGFGGTAGIITSYPFDTLRVMQQQSGNASAIGILKNLLAKDGPTALYRGMAVPLASVGFQNAMIFQSYTIFTRICSPSNSSNGPPSLTNVALGGLGAGALQSILICPVELVKIRMQLQKNIDYFSKNKRITPMNLAKSIWKNEGIRGIYRGFGITVLRDAPAHAFYFGTYEYLREKLHPGCRENCQESVSTMFIAGGLAGISSWIFNYPTDVIKTRLQAQTSSSMKYKGILDCTLKIIKEEGSIVLWRGLGATIARAFVMSSAIFPVYQIALRCFTNN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4932 322 Pfam Mitochondrial carrier protein 37 118 IPR018108 -
Tpr7g4932 322 Pfam Mitochondrial carrier protein 131 221 IPR018108 -
Tpr7g4932 322 Pfam Mitochondrial carrier protein 232 321 IPR018108 -
Tpr7g4932 322 PRINTS Mitochondrial carrier protein signature 41 54 IPR002067 GO:0055085
Tpr7g4932 322 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Tpr7g4932 322 PRINTS Mitochondrial carrier protein signature 193 211 IPR002067 GO:0055085
Tpr7g4932 322 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085
Tpr7g4932 322 SUPERFAMILY Mitochondrial carrier 38 312 IPR023395 -
Tpr7g4932 322 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 26 320 - -
Tpr7g4932 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 36 118 IPR018108 -
Tpr7g4932 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 220 IPR018108 -
Tpr7g4932 322 Gene3D Mitochondrial carrier domain 31 320 IPR023395 -
Tpr7g4932 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 318 IPR018108 -
Tpr7g4932 322 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 26 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4932 Tpr-Chr7 57106848 57109901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4932 26 322 Antiporters AT1G79900 56.711 3.21e-108 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4932 K15109 - gmx:100801221 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4932 7 57106848 57109901 Tpr7g4932 7 57106848 57109901 ECH