Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4919 ATGACGAAGAAGGAAGTTATAAAATCTCAGCAACATCAAACTTCAGACTCTAAGAATAATCTTTTTCGTACGTCGATGGTACGAACTTTCTCATGCAAGTTTTGCAAGAAACAATTTTCTTCTTCGCATGCTTTAGGTGGACACCAAAACGCTCATACGAGAGAGCGCATACTTGCAAAGCATAGCCAAGAGATTATGAAGGGTCATGTGACCCCTCATTATCCTTTTTCTTACTATAATTCTCCTAGTATTTCTACACCCCCTTATCAAGGATATGGATCCTATACTAGAGCCCCTACACCCCCTTATCAAGGATATGGATCCTATACTAGAGCACTTGAAATTAAGTTGGAGTCCATGTTTCAAAACCCTAGTAATATATGGATCCCACCTCCTTTCAAGCATGATTCTACTCCTATGTGGACACCAAGGCAAGAAATGAAAAAAAATTCTTCTATTGATGAAGTGAAGATTGATGTTCTTAATGCTAATATGAGTGTTGTTGGAGAGTCTTTAACAAGTGTTGCTACAAAGTCAAACTACAAGTCAAATGCAGTTGTCATAGGTGTTGATCATCCTCGTACCAACAAAGAAGAAGTTTTTGATTCTGAATATACTGAGTTTGATTTGTCCCTTAAACTTTAA 645 0.3736 MTKKEVIKSQQHQTSDSKNNLFRTSMVRTFSCKFCKKQFSSSHALGGHQNAHTRERILAKHSQEIMKGHVTPHYPFSYYNSPSISTPPYQGYGSYTRAPTPPYQGYGSYTRALEIKLESMFQNPSNIWIPPPFKHDSTPMWTPRQEMKKNSSIDEVKIDVLNANMSVVGESLTSVATKSNYKSNAVVIGVDHPRTNKEEVFDSEYTEFDLSLKL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4919 214 Gene3D Classic Zinc Finger 25 59 - -
Tpr7g4919 214 PANTHER ZINC FINGER PROTEIN JAGGED 9 197 IPR045320 GO:0003700
Tpr7g4919 214 SUPERFAMILY beta-beta-alpha zinc fingers 28 57 IPR036236 -
Tpr7g4919 214 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g4919 214 ProSitePatterns Zinc finger C2H2 type domain signature. 32 52 IPR013087 -
Tpr7g4919 214 ProSiteProfiles Zinc finger C2H2 type domain profile. 30 57 IPR013087 -
Tpr7g4919 214 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 9 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4919 Tpr-Chr7 57050022 57050666 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4919 27 65 C2H2 Transcription Factor Family AT5G01860 66.667 1.51e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g4919 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4919 - - cam:101494832 151.369