Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4918 ATGGCTTCAACCTCTGAACAATCCTCTACAACTTCAGAAGGTATTTCCCAAAAAAGTTGTGAAGAGAACAACATCAACAACAAGGGGAAGGAAGTTGTGCAATGTCAACAACATCAACCTTCAAACTCCATCAAGCTCTCAAAAGATGATTCAATTCGTGGGTCGAAAGTGCAAGAGCGTGATTTTGTCACCCCCACAAAAAATTTGGAGGTCGGTTCATCTTCGTTAAGCTGGGCTAATAATAAGACCAACAAAGAAAAGAACACTGGGAATAAATCCTCTGACTCGAAGAATTTTTCATGCAGCTTTTGTAGGAAACAATTTTCTACCTCGCAAGCTTTAGGAGGGCACCAAAATGCTCATAAGCGTGAGCGTGCACTCGCAAAACATCGTCTAGAGATGCATAATGGTTTTGGGATCCCTCGCCATCCTTTTCCTTACTACACTAATTATCCTAGCCTTTCTTCATCTTATTATGGGTTTGGATCCTTTAATAAAGCACTTGGAATTAGGATGGAGTCCATGATCCACAAGCCAAGCTATTCATTGACCCCATCTCCTTATAAGTTCGGTTCTCCTACATGGGCACCAATGCAAGAGATGAGAAACTATTCTTCAATGCAAGAGATGAGAAACTTTTCTTCACTTGGTGGATTGAAGATTGAGGGTCTTAACACAAATAATGGAAGTAGTGCAACACCAACTTGGAGGAATAATGTGATAAAATTAGATAATATTGGAGAGTCTTCGATAAATGTTACAAAGTCAAACGTGGTCCTTACGGATAATGATCATCATGGTATGAGGAAGGAAGAAGACCCTGATTCAGAATCTACTGAGCTTGAGCTTGATTTGACGCTTAAGCTTTGA 870 0.4011 MASTSEQSSTTSEGISQKSCEENNINNKGKEVVQCQQHQPSNSIKLSKDDSIRGSKVQERDFVTPTKNLEVGSSSLSWANNKTNKEKNTGNKSSDSKNFSCSFCRKQFSTSQALGGHQNAHKRERALAKHRLEMHNGFGIPRHPFPYYTNYPSLSSSYYGFGSFNKALGIRMESMIHKPSYSLTPSPYKFGSPTWAPMQEMRNYSSMQEMRNFSSLGGLKIEGLNTNNGSSATPTWRNNVIKLDNIGESSINVTKSNVVLTDNDHHGMRKEEDPDSESTELELDLTLKL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4918 289 PANTHER ZINC FINGER PROTEIN JAGGED 10 289 IPR045320 GO:0003700
Tpr7g4918 289 Gene3D Classic Zinc Finger 73 137 - -
Tpr7g4918 289 MobiDBLite consensus disorder prediction 262 281 - -
Tpr7g4918 289 MobiDBLite consensus disorder prediction 1 48 - -
Tpr7g4918 289 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
Tpr7g4918 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 126 IPR013087 -
Tpr7g4918 289 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 10 289 - -
Tpr7g4918 289 SUPERFAMILY beta-beta-alpha zinc fingers 95 126 IPR036236 -
Tpr7g4918 289 MobiDBLite consensus disorder prediction 1 66 - -
Tpr7g4918 289 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4918 Tpr-Chr7 57046026 57046895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4918 90 180 C2H2 Transcription Factor Family AT5G10970 45.263 2.08e-17 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g4918 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4918 - - cam:101494832 246.899