Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4916 ATGTGTGTTGTAGACATGTCCAATAATCCTCCTCCTCCTTCCTCTTCTCGTGCCAAAGATTTCTTTCCCTCTCCAGCTCTCTCTCTTAGCCTTGCAGGGATTTTTCGGCATGGTGGATTGGCGGCGGAAGGTGAAGGGGCGAGTACTAGTAACATGGAGGTGGAGGAAGGGGAGGAAGGGAGTACCGTTGGAGGTGATCAACGTGTTGAGGAAATTAGTAGCGAGTATTCCGGTCCAACGAGATCCAAATCAGAGGATGAATTTGAAGGAGATGAAGATGATGAAGGTGGTGGTGATGGAGATAATAAGCAAAAGAAGAAAAAAAGGAAGAAATATCATAGACACACAGCTGAACAGATTAGAGTCATGGAAGCGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAAAGGCAACAACTTAGCAAGCAATTAGGCCTTGCTCCAAGGCAAGTCAAATTTTGGTTCCAAAATCGTAGAACCCAAATCAAGGCAATACAAGAGAGACATGAAAATTCATTGTTGAAAACTGAAATAGAGAAATTAAGAGAGAAAAATAAGACCCTAAGAGAGACCATAAACAAAGCTTGTTGCCCTAATTGTGGGGTACCCAATACAAACAAAGATGGTGCCATGCCAACTGAAGAACAACAACTACGTATTGAAAATGTCAAACTCAAAGCTGAGGTAGAGAAGCTAAGAGCAGCTTTAGGGAAACATGCATCAGGAACAATGTCACCTTCATGTTCTACTAGCCATGACCAAGAAAATATTAAAAGTTCTTTGGATTTTTACACTGGAATTTTTGGTCTTGATGAATCAAGAATAATGGATATAGTAAACCAAGCAATGGATGAGCTTATAAAGATGGCTACAATGGATGAACCATTGTGGCTACGTAGTTTAGAGACTGGTCGTGAAATACTTAATTATGATGAATATATGAAGGAATTTTTAGTTGAAAATTCAGATAATGGAAGGCCAAAAAGATCCATTGAAGCTTCAAGAGATACAGGAGTTGTTTTTGCAGATCTTCCAAGGATTGTCCAATGTTTTCTTGATGCTAACCAATGGAAGGAAATGTTTCCATGTTTAATATCTAAGGCTGCAACAGTTGACATTATATGCAAAGGAGAAAGTTCTAACAAGAATGGTGCTGTCCAACTGATGTTTGCTGAGCTGCAAATGTTAACACCAATGGTTCCTACTAGAGAAGTGTATTTTGTCAGATACTGCAAACAATTGAGTGGTGAAAAATGGGCAATTGTTGATGTGTCCATAGACAAAGTAGAAGACAACATTGATGCATCCCTCGTGAAGTGCAGAAAACGACCATCTGGTTGTATTATTGAGGATAAGTCAAATGGTCATTGCAAAGTAATATGGGTAGAACACTTGGAGTGCCAAAAGAGTGCAGTTCATTCGATGTATCGCACCATTGTAAACAGTGGCCTAGCTTTTGGGGCAAGACATTGGATTGCGACCCTTCAACTTCAATGTGAACGTCTAGTTTTCTTCATGGCAACAAATGTTCCCATGAAGGATTCAACTGGTGTTGCCACATTGGCTGGGAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGTCAAGCTATTAGTGCATCAAGCTTTCATACATGGACCAAAGTTACTAGTAAAACTGGAGAAGATATAAGGATTAGTTCTAGAAAGAATTTGAATGATCCTGGTGAACCTCTTGGGTTGATACTTTGTGCAGTTTCTTCTGTATGGTTGCCTATATCTCCTAATGTTCTGTTTGATTTCTTGAGGGATGAAGCTCGTCGAACTGAGTGGGATATCATGTCTAGTGGTGGGGAAGTGCAGTCCATTGCCAATTTAGCCAAAGGACAAGACAGAGGCAATGCAGTAACAATCCAAACAATTAAATCTAAAGAAAACAATATGTGGATACTGCAAGATAGCTGCACAAACTCTTATGAATCAATGGTGGTATATGCTCCTGTGGACATTACTGGTATTCAGTCTGTGATGACAGGTTGCGATTCGAGCAATCTTGCCATACTTTCCTCGGGATTCTCGATTATTCCTGACGGTCTAGAGTCAAGGCCAATGGTTATCACTTCAAGGCAGCAAGAGAAAAACACAGATGGAGGATCTTTGTTTACAATAGCATTCCAGATCCTTACCAATTCTTCTCCTACTGCCAAACTAACAATGGAGTCTGTGGACTCGGTCAACTCTCTTGTATCGTGTACATTGAGACACATCAGAACAAGTTTAAATTGCGAAGATGGTCAGTGTTCGGTTTGGCGAAAAATAGTCAGTCCTTCTCCCCTTAAGAGTTTTGTTCATTATTCCATTAGAAAGGAAGGTTTGGCCTTAATATTAATTTGTATCTGCAGCTCTATGTAG 2406 0.4015 MCVVDMSNNPPPPSSSRAKDFFPSPALSLSLAGIFRHGGLAAEGEGASTSNMEVEEGEEGSTVGGDQRVEEISSEYSGPTRSKSEDEFEGDEDDEGGGDGDNKQKKKKRKKYHRHTAEQIRVMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLREKNKTLRETINKACCPNCGVPNTNKDGAMPTEEQQLRIENVKLKAEVEKLRAALGKHASGTMSPSCSTSHDQENIKSSLDFYTGIFGLDESRIMDIVNQAMDELIKMATMDEPLWLRSLETGREILNYDEYMKEFLVENSDNGRPKRSIEASRDTGVVFADLPRIVQCFLDANQWKEMFPCLISKAATVDIICKGESSNKNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSGEKWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSAVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCQAISASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPLGLILCAVSSVWLPISPNVLFDFLRDEARRTEWDIMSSGGEVQSIANLAKGQDRGNAVTIQTIKSKENNMWILQDSCTNSYESMVVYAPVDITGIQSVMTGCDSSNLAILSSGFSIIPDGLESRPMVITSRQQEKNTDGGSLFTIAFQILTNSSPTAKLTMESVDSVNSLVSCTLRHIRTSLNCEDGQCSVWRKIVSPSPLKSFVHYSIRKEGLALILICICSSM* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4916 801 Coils Coil 165 192 - -
Tpr7g4916 801 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 22 760 - -
Tpr7g4916 801 SUPERFAMILY Homeodomain-like 99 167 IPR009057 -
Tpr7g4916 801 ProSiteProfiles START domain profile. 269 505 IPR002913 GO:0008289
Tpr7g4916 801 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 22 760 IPR042160 -
Tpr7g4916 801 SUPERFAMILY Bet v1-like 272 502 - -
Tpr7g4916 801 CDD START_ArGLABRA2_like 274 501 - -
Tpr7g4916 801 ProSitePatterns 'Homeobox' domain signature. 141 164 IPR017970 GO:0000981|GO:0006355
Tpr7g4916 801 Gene3D - 279 497 IPR023393 -
Tpr7g4916 801 Coils Coil 216 236 - -
Tpr7g4916 801 ProSiteProfiles 'Homeobox' domain profile. 106 166 IPR001356 GO:0003677
Tpr7g4916 801 SUPERFAMILY Bet v1-like 531 754 - -
Tpr7g4916 801 Pfam START domain 280 502 IPR002913 GO:0008289
Tpr7g4916 801 MobiDBLite consensus disorder prediction 42 117 - -
Tpr7g4916 801 MobiDBLite consensus disorder prediction 1 21 - -
Tpr7g4916 801 Pfam Homeodomain 109 164 IPR001356 GO:0003677
Tpr7g4916 801 CDD homeodomain 113 164 IPR001356 GO:0003677
Tpr7g4916 801 Gene3D - 97 179 - -
Tpr7g4916 801 SMART HOX_1 108 170 IPR001356 GO:0003677
Tpr7g4916 801 SMART START_1 278 502 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4916 Tpr-Chr7 57030986 57037221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4916 72 762 Homeobox Transcription Factor Family AT1G79840 65.100 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr7g4916 START 3.2e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4916 K09338 - gmx:100809926 1254.58