Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4907 ATGATGGCTGGGAACCCTAATTGGTGGAACATGCATCCACCATCTTTGAATATCCCTCCTCAATATATGCTTGGATCTTCTTCAATCCCTTTCAATTCCTTGACTGAAAATTCTGAAGTACCTCCTCAATCATGGAGTCAACTACTTTTTACTGGAGTACCTGGAGAAGAAGAGAGACTTGGTTTCAATCATTTTGAGCCAAAAAACTCAGAAAACTGGGATGTGCAAATTCTGAATCCATCTTCAAGAGTTCCTATTATGGATGTAATAAAGCATGAAGTTTCTCAAAATGAGAATTTTTATGGCCAACAAGAGCATCATCATCATCATGAAGAGTTTCATCCTAATAATTCTGGATCACTTGGTTCATCTTGGTCACATATGGTGCCAGTTTCTTCTCCAAGTTCTCATGTCACTAGCTTAAGTAGTGATAATAATATGTTGGATTTCACTTATAACAAGCTAGACCATAGCAAGAATTTACTACAAGATCAAACATCTGAGTGTAATAGTTCCACTATTAATGGAGTCAATAAGAAGGCTAGGGTTCAGCCATCTTCATCAAGTCAACCACCTCTAAAGGTGAGGAAGGAGAAGCTAGGTGATAGAATAACAGCACTTCACCAGCTAGTTTCTCCATTTGGAAAGACTGACACAGCTTCTGTATTATTAGAAGCCATCGGATACATCAGGTTTCTGCAGAGTCAAATTGAGGCACTAAGCTCTCCTTACTTGGACACTGCAGCATCAAAAAACATGATGAGGAATCAACATTCTGTGCATGTAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGGATGACACTGGCCTAAAAAGAAAGGGTGCTCCAATTCCAAACCAGAATGCAGGAGCTAATAATAAGGCAAAGGACTTGAGGAGTAGAGGGTTGTGTTTGGTTCCTGTGTCATGCACACAACATGTTGGAAGTGAAAATGGAGCTGATTATTGGGCACCAGCATTTGGAAGTGGATTTTAA 1008 0.3988 MMAGNPNWWNMHPPSLNIPPQYMLGSSSIPFNSLTENSEVPPQSWSQLLFTGVPGEEERLGFNHFEPKNSENWDVQILNPSSRVPIMDVIKHEVSQNENFYGQQEHHHHHEEFHPNNSGSLGSSWSHMVPVSSPSSHVTSLSSDNNMLDFTYNKLDHSKNLLQDQTSECNSSTINGVNKKARVQPSSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSSPYLDTAASKNMMRNQHSVHVERNSVFPEDPGQLLDDTGLKRKGAPIPNQNAGANNKAKDLRSRGLCLVPVSCTQHVGSENGADYWAPAFGSGF* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4907 335 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 10 322 - -
Tpr7g4907 335 CDD bHLH_AtbHLH_like 194 241 IPR045239 -
Tpr7g4907 335 PANTHER OS05G0228400 PROTEIN 10 322 - -
Tpr7g4907 335 MobiDBLite consensus disorder prediction 102 121 - -
Tpr7g4907 335 Gene3D - 194 260 IPR036638 GO:0046983
Tpr7g4907 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 184 233 IPR011598 GO:0046983
Tpr7g4907 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 245 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4907 Tpr-Chr7 56971701 56976497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4907 1 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 37.960 6.70e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4907 - - gmx:100802121 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4907 7 56971701 56976497 Tpr7g4907 7 56971701 56976497 ECH