Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4906 ATGTCTACACCATTAGAACATGATTACATAGGTTTGACAGATAATTCTTCAATGGACAAAACATCTTCATCTCTCAACTTCAAGGAGACAGAGCTTAGACTAGGCTTACCTGGTTGTGAATCTCCTGACAGAAAACCAGTCTCTTTCTTTAGTAACAAGGATTTGAACATTAATGTTTGTTCTCCTTTGAAGAACCTTGTAACTAGTGTTGGAGCTAAAAGAGGTTTCTCTGATGCTATTGATGAATCTTCTAGCAAATGGATTTTTTCTGTTAATGATGGGTCTCAAGCTGGAATTGGAACTACTTTGTTTTCTCCTAGAGGAGAAGGAAATGTTGGAAAATCTCTTGTTGGTTTAGAGACTCAAACTAATATAAATGTACCAAAGAATATCAATGAGATTCTTCACCAATCTGTGAAGCCAGTACATGAAAAGAATAAACAGGTTGTTGGAACAAATGAGGATGCTAATGCTCCTGCTGCAAAGACACAGATTGTGGGATGGCCACCAATTCGATCGTTTCGAAAGAACACGATGGCATCAAATTTGACAAAGAGCAATGATGAAGCTGAGGGAAAACCAGGATTTGAATGTCTCTATGTAAAAGTTAGTATGGATGGTGCTCCTTATCTCAGAAAAGTTGATCTCAAAATTTACAACAACTATATGGAACTTTCTTCAGCTCTTGAGAAGATGTTCACATGCTTTACCATCGGTCAATTCAATTCTCCTGGAGTTCCTGGGAAAGATGGACTAAGTGAGAGCTCTTTGAGGGATCTTCTTCATGGATCTGAATATGTTCTTACATATGAAGATAAAGATGGAGATTGGATGCTTGTAGGTGATGTTCCTTGGGGGATGTTCGCCGACTCGTGTAGGAGACTAAGGATCATGAAAGGCTCCGAGGCAATTGGGCTAGCTCCAAGAGGCATCGAAAAATCTCGGAGCCAATACTAG 957 0.3929 MSTPLEHDYIGLTDNSSMDKTSSSLNFKETELRLGLPGCESPDRKPVSFFSNKDLNINVCSPLKNLVTSVGAKRGFSDAIDESSSKWIFSVNDGSQAGIGTTLFSPRGEGNVGKSLVGLETQTNINVPKNINEILHQSVKPVHEKNKQVVGTNEDANAPAAKTQIVGWPPIRSFRKNTMASNLTKSNDEAEGKPGFECLYVKVSMDGAPYLRKVDLKIYNNYMELSSALEKMFTCFTIGQFNSPGVPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWGMFADSCRRLRIMKGSEAIGLAPRGIEKSRSQY* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4906 318 Gene3D - 195 311 - -
Tpr7g4906 318 ProSiteProfiles PB1 domain profile. 198 300 IPR000270 GO:0005515
Tpr7g4906 318 PANTHER AUXIN-RESPONSIVE PROTEIN 16 309 - -
Tpr7g4906 318 Pfam AUX/IAA family 29 309 IPR033389 -
Tpr7g4906 318 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 16 309 IPR003311 GO:0005634|GO:0006355
Tpr7g4906 318 SUPERFAMILY CAD & PB1 domains 199 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4906 Tpr-Chr7 56947870 56953043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4906 202 308 B3 DNA Binding Superfamily AT4G23980 29.907 1.89e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Tpr7g4906 AUX_IAA 3.2e-88 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4906 K14484 - gmx:100806699 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4906 7 56947870 56953043 Tpr7g4906 7 56947870 56953043 ECH