Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4893 ATGGCATCCCTTGTATTCAGTTGCTTCATCATTTTCTTGGTTTCTGTCACTACTGTTCAATCTGCAAGACAGTTCCATGTTGGTGATCACTTGGGTTGGCGTCAACCTGATCAAAACAACACTGCTTTTTACACTCAATGGGCTGAAAGAAACAGATTCCAAATTGGAGACTCCCTCGTATTTGAGTATGAGAAGGATTCAGTTCTTAGTGTGGAGAAATTTGATTACTTCAACTGTGACACAAGTGAACCAATCACTACTTTCACCAATGGAAAGAGCACTTTTAATCTTGACAGATCAGGACCTTTCTATTTCATAAGTGGAACTGATGATCATTGCAACCATGGCCAAAAATTGCTCGTTGAAGTTATGGCGCCGCATTCAATTCCAGCATCTCCACCTACCACCATTGCAGTTCCGCCTGAAGGTTCATCACCGATCATGGCTCCTTCGGATTCACCTTATTCTTCTGATTCCGTGGATCAGGCTACTTCCTCTTCCACCATGGTGCTTGCTTCAAGTTTTCTGTCTACTTTGATCACATTTGGAATTGTGACGATGTTAGCACTCTAA 573 0.4223 MASLVFSCFIIFLVSVTTVQSARQFHVGDHLGWRQPDQNNTAFYTQWAERNRFQIGDSLVFEYEKDSVLSVEKFDYFNCDTSEPITTFTNGKSTFNLDRSGPFYFISGTDDHCNHGQKLLVEVMAPHSIPASPPTTIAVPPEGSSPIMAPSDSPYSSDSVDQATSSSTMVLASSFLSTLITFGIVTMLAL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4893 190 SUPERFAMILY Cupredoxins 22 124 IPR008972 -
Tpr7g4893 190 CDD OsENODL1_like 23 124 IPR041846 -
Tpr7g4893 190 Gene3D - 22 133 IPR008972 -
Tpr7g4893 190 Pfam Plastocyanin-like domain 38 117 IPR003245 GO:0009055
Tpr7g4893 190 PANTHER EARLY NODULIN-LIKE PROTEIN 2 6 179 - -
Tpr7g4893 190 PANTHER BLUE COPPER PROTEIN 6 179 IPR039391 GO:0009055
Tpr7g4893 190 ProSiteProfiles Phytocyanin domain profile. 23 125 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4893 Tpr-Chr7 56875972 56877062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4893 8 127 Phytocyanin Superfamily AT1G79800 53.333 1.32e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4893 - - adu:107461559 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4893 7 56875972 56877062 Tpr7g4893 7 56875972 56877062 ECH