Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4881 ATGACTCGGCGGTGCTCTCACTGCAGCAATAACGGCCATAACTCACGGACATGTCCGTCTAGAGGCAGCGGAGGCGGTGGCGGCGGAGGGGTTAGGCTTTTCGGAGTTAGATTAACCGATGGATCAATCATTAAAAAAAGCGCGAGTATGGGAAACCTTAACCTCGCTGCACTTCACCATTGTTCTTCTTCTTCTTCTTCGCTTAATCCTGGTTCATCGATTAATCCCGGTTCACCTTGTTCTGACCCGCCTAATGACCCTGACGGTTATTTGTCTGATGATCCGGCTCATGCTTCTACCTTCGTCTCCCGCCGCGGCGAAAGAAAAAAAGGTGTTCCATGGACTGAAGAAGAACATCGATTGTTCTTGGTTGGTCTCCATAAGCTAGGCAAAGGAGACTGGCGTGGGATAGCACGTAATTTTGTTGTGTCAAGGACTCCTACTCAAGTAGCAAGTCATGCACAGAAGTATTTTATCCGGCAGAGTAATGCTACTAGGAGAAAGAGGCGTTCCAGCCTTTTTGACATGGCTCCAGATATGTGTCCTGATTCAACTTTGATGCCAGAAGAACAAGTACTACTTCCACCTTCTGAGAACTCACAACCTTGCAATGGAAAATCACAGCCATCACTAAATCTCTCTCTCAAGTCAGAATATGAACCGATGGAAACTACATCTGAAGAAAATGCAGAAGAGGGCAATGAAACTACAATGGGATCAAAGGGATCGACACCAATGACTCATGGATTTTTCCCATCTTATGTACCTGTTCCATTTTCAATATGGCCATCAATTGGAGCTCCATTTGAAGAAGTCAATGGAGGAGAGACATCTCATCATAGTCATCATCAGGTTCTCAAGCCGATACCAGTCATTCCAAAGGAACCTGTCAACGTTGATGAACTTGTGGGAATGTCTCATCTGAGCATTGGGGAAGCACAGGTACATGACAGAGAGCCTTCTCCGCTTTCCTTGAAGTTGTTAGGAGAGCCCTCAAGGCAATCAGCATTCCATGCAAATGCTCCAGTTGGTGGTTCCGATCTAAACGGTGGCAAAAACAGCGCCATTCAAGCGGTTTGA 1080 0.4639 MTRRCSHCSNNGHNSRTCPSRGSGGGGGGGVRLFGVRLTDGSIIKKSASMGNLNLAALHHCSSSSSSLNPGSSINPGSPCSDPPNDPDGYLSDDPAHASTFVSRRGERKKGVPWTEEEHRLFLVGLHKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMAPDMCPDSTLMPEEQVLLPPSENSQPCNGKSQPSLNLSLKSEYEPMETTSEENAEEGNETTMGSKGSTPMTHGFFPSYVPVPFSIWPSIGAPFEEVNGGETSHHSHHQVLKPIPVIPKEPVNVDELVGMSHLSIGEAQVHDREPSPLSLKLLGEPSRQSAFHANAPVGGSDLNGGKNSAIQAV* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4881 359 MobiDBLite consensus disorder prediction 219 241 - -
Tpr7g4881 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 162 IPR017930 -
Tpr7g4881 359 PANTHER TRANSCRIPTION FACTOR KUA1 1 353 - -
Tpr7g4881 359 Gene3D - 112 163 - -
Tpr7g4881 359 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 109 161 IPR006447 GO:0003677
Tpr7g4881 359 MobiDBLite consensus disorder prediction 195 214 - -
Tpr7g4881 359 PANTHER OS01G0187900 PROTEIN 1 353 - -
Tpr7g4881 359 Pfam Myb-like DNA-binding domain 113 158 IPR001005 -
Tpr7g4881 359 MobiDBLite consensus disorder prediction 1 26 - -
Tpr7g4881 359 MobiDBLite consensus disorder prediction 1 21 - -
Tpr7g4881 359 SMART sant 110 160 IPR001005 -
Tpr7g4881 359 ProSiteProfiles Myb-like domain profile. 106 158 IPR001005 -
Tpr7g4881 359 CDD SANT 113 158 IPR001005 -
Tpr7g4881 359 SUPERFAMILY Homeodomain-like 108 163 IPR009057 -
Tpr7g4881 359 ProSiteProfiles SANT domain profile. 114 162 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4881 Tpr-Chr7 56748858 56752420 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr7g4881 Myb_DNA-binding 6.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4881 - - gmx:778036 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4881 7 56748858 56752420 Tpr7g4881 7 56748858 56752420 ECH