Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4876 ATGGGAAAAGCTTCTAGGTGGTTAAAGGGGTTGTTTGGATTGAAGAAAGAAAAGGAACATAGTAACAAATCAGGTCCATTGGTTTTTGACAAGAAGGAGAAGAAAAGATCAGGGAAAGATGATAATCACATTGATTATCAGAATCACATTCCTCAAACCAATGCTGCAGCATTTGATGCTAATGCTTGGTACAAATCCTATGTTGCTGAAAAACAGAATGAGCATAGAAAAAATGCAATTTTGCTGAGGTCATTAAGCCATGGAAGTGGCAGATTGTTTTTTGGAAGCAGGGAGAAGTTGGCTGCTGTAAAGATCCAAACTTTTTTCAGAGGCTATTTGGCGCGAAAGGCTCTTAGAGCGCTAAAAGCACTTGTTAAGATACAAGCTCTTGTTAGAGGATACCTAGTTCGAAAAAGGGTTGCTGCAACACTTCACAGGATGCAAGCACTCATGAGAGCTCAAGCTGTTATCCGGTCAAGGCGAGCTCGTAATTCCATCGACAAGGAGAACATATATCAGTCAGAAATCCGTGGGCGAAAACATGTGCAAACATTTGATGAAACTAGAAATGAACAACCCAATAAATGGCTTCCAAATTCGTCAAGTAAATTTGCTCCAAACCCGAAAATTGTTGTGGTTGATCCTCACAGGCCTCGTTCGAGATCTACAATGTCTGAATCTGGAGATGATCTGCATGATTACTATGAAGCAACATCATCCTCTCGTCCTTATCCAATTCCACGTCGAATTTCAGTTCACGAATGCCCAAATTCTCAAGATTTTGATTGGTCCGTCGATAATGTCAACAATGAACGTAAGCTATACACGGCTCATAGCACTCCTAGATTAGCCAATTTTACGCAAACTAATACTCCGGAGAGGAGTGTTTCTGGAGAGACAGCCTTGTTCTTGCCTTACGCCAATTTTCCTAACTACATGGCTAATACTCATTCATCTAAGGCAAGAGTAGTAAGGTCTCACAGTGCTCCCAAGCAAAGACCTGAGCTCAAGAAAAGGGTTCCATTTGATGAAATCATGGCCAAAAGAAATAGCATAAGTTGTGTTAGAATGCATTGGTAA 1080 0.4083 MGKASRWLKGLFGLKKEKEHSNKSGPLVFDKKEKKRSGKDDNHIDYQNHIPQTNAAAFDANAWYKSYVAEKQNEHRKNAILLRSLSHGSGRLFFGSREKLAAVKIQTFFRGYLARKALRALKALVKIQALVRGYLVRKRVAATLHRMQALMRAQAVIRSRRARNSIDKENIYQSEIRGRKHVQTFDETRNEQPNKWLPNSSSKFAPNPKIVVVDPHRPRSRSTMSESGDDLHDYYEATSSSRPYPIPRRISVHECPNSQDFDWSVDNVNNERKLYTAHSTPRLANFTQTNTPERSVSGETALFLPYANFPNYMANTHSSKARVVRSHSAPKQRPELKKRVPFDEIMAKRNSISCVRMHW* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4876 359 PANTHER IQ-DOMAIN 5-RELATED 1 348 - -
Tpr7g4876 359 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 348 - -
Tpr7g4876 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 141 IPR027417 -
Tpr7g4876 359 MobiDBLite consensus disorder prediction 18 41 - -
Tpr7g4876 359 Gene3D - 52 124 - -
Tpr7g4876 359 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Tpr7g4876 359 Pfam IQ calmodulin-binding motif 101 119 IPR000048 GO:0005515
Tpr7g4876 359 SMART iq_5 97 119 IPR000048 GO:0005515
Tpr7g4876 359 SMART iq_5 120 141 IPR000048 GO:0005515
Tpr7g4876 359 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Tpr7g4876 359 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
Tpr7g4876 359 Pfam Protein of unknown function (DUF4005) 288 353 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4876 Tpr-Chr7 56672077 56674748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4876 1 357 IQD Protein Family AT3G16490 37.376 1.82e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4876 - - gmx:100797686 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4876 7 56672077 56674748 Tpr7g4876 7 56672077 56674748 ECH
Tpr7g4876 7 56672077 56674748 Tpr5g2482 5 46512436 46516157 PCT