Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4858 ATGGATTGGTTAGCCAATCGTTGGACTGGCGTTGCCGCCGGAATATGGATCCAATGGAGCTGTGGTGCATCATACACCTTCAGTATCTACTCACCTCTCCTCAAATCCACACAAAACTACAACCAATCAACGCTCGACACTGTCTCCGTATTCAAAGACATTGGCGCCAACTTTGGCGTCCTCTCCGGCCTCCTTTACTCGGCTGTCACACCTTACGGTGACCGCCTACTTTCGTCCAATAAGTCTAAAGGGAGTTCCCTTGGTGGGCCTTGGATTGTTGTGGCTGCCGGTGCTGTTCAGATCTTTGTGGGCTTTTTCTTCATTTGGGCTTCTGTTGTGGGCTTGATCCATCAGCCTCCTGTTCCAGTCATGTGCTTTTTTGCTTGGCTTGCTGCTAATGGTCAGGCTTTGAATACTACTAATGTTGTTACTGGGTTGCGTAATTTTCCACAATATAGTGGCACCATCATTGGTATCATGAAGGGTTTTCTTGGGCTTAGTGGAGCTATCTTGATTCAACTGTACCACACATTTTTTTATGGTGACCCAGCCACCTTCCTTCTGATGCTAGCTTGCTTACCTGCAATCATCTCTGTGTTATTTATGTTTTTGTTGAGGATCTATCAAGTGGAAGACTGTGATTACAAGAAGCATTTAGATGATTTCTCTGTGATCACTGTCATTATTGTTGTGTATCTCATGTTCATAATACTTTTGCAAAACGCCGGGAGCTTACCGTATTGGGTACGAGTGTTTACATTTGTGGTCCTTATGGTTCTACTAGCATTGCCTTTTGGCATTGCCGTGAAAGCTCATTGGGAGGACTCGAGGATATTTTCACAAGCTCCCTCCATTGAGACGGCTGCACCTTCAATAGAATACCAAGAGCTGCCTAGAGAGGAGGTCCAAGTACAGGATACGTTAGGTGATGTGTTGCCCCTTGAACAAGAAATGAACCTCTTACAAGCTATGTGTACTGTTGAGTTTTGGATGTTGTTTGTGACCATGATAGCCGGTTTGGGTTCTGGGCTTTCAATGATAAATAATATGAGCCAAATAGGGGAATCTCTTGGGTATAGTGCTATTGAGATTGGCAATATGGTGTCATTGTGGAGTATGTGGAATTTTCTCGGCCGTTTTGCTGGCGGCCGTGTATCCGATTATATCATGCAAAGAGGTTGGCCACGGCCCCTGTTGTTGACTGTAACTCTGGGATTTACGATTCTTGGTCATTTAATCATAGCTTCTGGTTTTCCTGGAAATTTTTACTTGGGTCCTGTCCTGGTGGGAATATGCTATGGTACGAATTGGTCCTTAATGCCAACAATCACTTCTGAGATATTTGGTGTGAAGCACATGGGTACCATTTTCAACACTATTGCTGCATCAAGTCCACTTGGGTCTTATATACTTTCTGTGAGAGTTGTTGGATATATATATGACAAGGAAGCCAATAAAGAAGATAACTCATGCTTCGGCATCCACTGTTTCATGTTGTCGTTTCTGATCCTGGCTGGGGTGACTTTTCTAGCATTTTTGGTCAGTCTGGCGTTGTATTTCCGTACCCGAAGGTTCTATAAGCTAGTTGTGCTTAATAGATTAAAACATTATGCACGGTGA 1620 0.4395 MDWLANRWTGVAAGIWIQWSCGASYTFSIYSPLLKSTQNYNQSTLDTVSVFKDIGANFGVLSGLLYSAVTPYGDRLLSSNKSKGSSLGGPWIVVAAGAVQIFVGFFFIWASVVGLIHQPPVPVMCFFAWLAANGQALNTTNVVTGLRNFPQYSGTIIGIMKGFLGLSGAILIQLYHTFFYGDPATFLLMLACLPAIISVLFMFLLRIYQVEDCDYKKHLDDFSVITVIIVVYLMFIILLQNAGSLPYWVRVFTFVVLMVLLALPFGIAVKAHWEDSRIFSQAPSIETAAPSIEYQELPREEVQVQDTLGDVLPLEQEMNLLQAMCTVEFWMLFVTMIAGLGSGLSMINNMSQIGESLGYSAIEIGNMVSLWSMWNFLGRFAGGRVSDYIMQRGWPRPLLLTVTLGFTILGHLIIASGFPGNFYLGPVLVGICYGTNWSLMPTITSEIFGVKHMGTIFNTIAASSPLGSYILSVRVVGYIYDKEANKEDNSCFGIHCFMLSFLILAGVTFLAFLVSLALYFRTRRFYKLVVLNRLKHYAR* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4858 539 Pfam Major Facilitator Superfamily 332 524 IPR011701 GO:0022857|GO:0055085
Tpr7g4858 539 Gene3D MFS general substrate transporter like domains 327 536 IPR036259 -
Tpr7g4858 539 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 537 - -
Tpr7g4858 539 SUPERFAMILY MFS general substrate transporter 4 206 IPR036259 -
Tpr7g4858 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 327 539 IPR020846 GO:0022857
Tpr7g4858 539 CDD MFS_Mch1p_like 7 511 - -
Tpr7g4858 539 SUPERFAMILY MFS general substrate transporter 229 524 IPR036259 -
Tpr7g4858 539 Pfam Nodulin-like 7 69 IPR010658 -
Tpr7g4858 539 Pfam Nodulin-like 90 268 IPR010658 -
Tpr7g4858 539 PANTHER F25A4.25 PROTEIN 4 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4858 Tpr-Chr7 56541580 56544676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4858 1 536 Nodulin-like Gene Family AT1G74780 54.344 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4858 - - gmx:100775628 856.284