Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4857 ATGAATTGGTTAACAAATCGTTGGACCGGCGTCGCCGCCGCAATATGGATCCAATGGAGTTGCGGTTCATCATACACTTTCAGCATCTACTCACCTCTCCTCAAATCCACACAAAACTATTCTCAATCAACGCTTGACACCGTTTCCGTTTTCAAAGACATCGGAGCTAACTTCGGTGTTCTTTCCGGTCTCCTTTACTCCGCCGTCACACCTTACGGTGACCGGCAATCTAAATCGAGTTCCTTTGGTGGGCCTTGGATTGTTGTGGCTGTTGGTGCTGTTCAGTGTTTTGTGGGCTTTTTGTTTATTTGGGCTTCTGTTGTGGGCTTGATTCTTCAGCCACCTGTTAGTGTAATGTGTTTTTTTGCTTGGCTTGCTGCTAATGGACAAACTTTCTTGAATACTACAAATGTTGTTACTGGTTTGCGTAATTTTCCTCAATATAGTGGCACTATCATTGGTATTATGAAGGGTTTTCTTGGGCTTAGTGGAGCTATCTTGATTCAACTATATCATACATTTTTTGATGGTGACCCAGCCACCTTTCTTCTGATGCTAGCTTGCTTACCTGCAATCATCTCTGTGTTGTTTATGTTTCTGTTGAGAATCTATCAAGTGCAAGACTATGATTACAAGAAGCATTTGGATGATTTCTCCATGGTCACTGTTATTATTGTTGTGTATCTCATGTTCATAATAATTTTGCAGAATTTCGTGAGCTTACCGTATTGGTCACGGGTTTTTACATTTGTGGTCCTTATGGTTCTATTAGCATCGCCTTTTGGCATTGCTGTGAAAGCTCATTGGGAGGACTCGAGGATCTTTTCACAAGGTCCCTCCATTGAGACTGCTGCCCCTACAATGGAATACCAAGAGCTGCCTAGAGAGGAGGTGCAAGTGCATAATACCGTAGATGATGTGTTGCCCCTTGAACAAGAAAAGAACCTATTACAAGCTATGTGTACTGTTGAATTTTGGATGTTGTTTGTGACCATGATATCCGGTTTGGGTTCTGGGCTGGCAACAATAAATAATATGAGCCAAATAGGACAATCTCTTGGGTATAGTACTATTGAGATTAGCAATATGGTGTCATTGTGGAGTATGTGGAATTTTCTTGGCCGTTTTGGTGGCGGCCAGGTATCCGATTATATCATGCATAAAAGAGGTTGGCCAAGGCCCCTGTTGATGACTGTAACTCTGGGGATTATGATTCTCGGTCATTTAATCATAGCTTCTGGTTTCCCTGGAAATTTTTATTTGGGTCCTGTTCTGGTCGGAATATGCTATGGTACAAATTGGTCGTTAATGCCAACAATCACTTCTGAGATATTTGGTGTGCAGCACATGGGTACCATTTTCAACACTATTGCTGCATCAAGTCCACTTGGGTCATATATACTTTCTGTGAGAGTTGTTGGATATATATATGACAAGGAAGCCAATAAAGAAGATAACTCATGCTTCGGCATCCACTGTTTCATGTTGTCGTTTCTGATCCTGGCCGGTGTGGCTTTTGTGGCATTTCTAGTCGGTCTGGCGTTGTATTTCCGGACCCAAAAGTTCTATAAGCAAGTTGTGCTTAGAAAATTAAACTATTATGTGCGATGA 1611 0.419 MNWLTNRWTGVAAAIWIQWSCGSSYTFSIYSPLLKSTQNYSQSTLDTVSVFKDIGANFGVLSGLLYSAVTPYGDRQSKSSSFGGPWIVVAVGAVQCFVGFLFIWASVVGLILQPPVSVMCFFAWLAANGQTFLNTTNVVTGLRNFPQYSGTIIGIMKGFLGLSGAILIQLYHTFFDGDPATFLLMLACLPAIISVLFMFLLRIYQVQDYDYKKHLDDFSMVTVIIVVYLMFIIILQNFVSLPYWSRVFTFVVLMVLLASPFGIAVKAHWEDSRIFSQGPSIETAAPTMEYQELPREEVQVHNTVDDVLPLEQEKNLLQAMCTVEFWMLFVTMISGLGSGLATINNMSQIGQSLGYSTIEISNMVSLWSMWNFLGRFGGGQVSDYIMHKRGWPRPLLMTVTLGIMILGHLIIASGFPGNFYLGPVLVGICYGTNWSLMPTITSEIFGVQHMGTIFNTIAASSPLGSYILSVRVVGYIYDKEANKEDNSCFGIHCFMLSFLILAGVAFVAFLVGLALYFRTQKFYKQVVLRKLNYYVR* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4857 536 CDD MFS_Mch1p_like 7 508 - -
Tpr7g4857 536 Pfam Nodulin-like 7 264 IPR010658 -
Tpr7g4857 536 SUPERFAMILY MFS general substrate transporter 244 521 IPR036259 -
Tpr7g4857 536 SUPERFAMILY MFS general substrate transporter 4 203 IPR036259 -
Tpr7g4857 536 PANTHER F25A4.25 PROTEIN 3 533 - -
Tpr7g4857 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 323 536 IPR020846 GO:0022857
Tpr7g4857 536 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 533 - -
Tpr7g4857 536 Pfam Major Facilitator Superfamily 328 521 IPR011701 GO:0022857|GO:0055085
Tpr7g4857 536 Gene3D MFS general substrate transporter like domains 314 528 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4857 Tpr-Chr7 56538690 56541546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4857 1 533 Nodulin-like Gene Family AT1G74780 55.948 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4857 - - gmx:100775628 883.634