Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4852 ATGAGTCGAGAACAACCGAAGCGAGGGAAGCATGAAAAAGTTTGTGATGGTGCTAAGAAGGTTATTGTTGCTGTCAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCTCTAACTAATGTTGTTCAACCTGGTGATTGCATTACTCTGCTAGTGGTTGTACCTTCACAAAGTTCAGGCCGAAAATTATGGGGTTTTCCGAGGTTTGCTGGTGACTGTGCTAATGGACACAAGAAGTCAACAATACTGGGAGCTAGCTCAGAGCAAAAGAATGATATCACCGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGGCTGCAGAAGCCAAGAAAGCTCAAGCCAACTGGGTCGTCTTTGATAAAAATCTCAAGCATGAAGAAAAACAATGCATGGAAGAACTTCAGTGTAACATTGCGGGTATGAAGGGTTCCCAACCGAAGGTACTCCGCTTCAATTTGGTAGGATCGCAAAAGAAGGATCTTGAAGAAACTTGTTCATTACCTTCCGAGCAGCACGATATGCCTGGAAAACAATCCAAGAAGAAGAATGGTTCTTTGAAATCTACAATTGGACAAGTTGTCACGCCAACTAGCAGCCCCGAGTTAGAGACATCATTTACTGCAACTGAAGTTGGAACTTCATCGGTTTCAAGCTCTGATCCTGGAACTTCACCATTTTTTGTCTCCGAGATCATTGCCGAGTCAAAGAAAGAAGAAACTATCATAGAAAATCAAGAAACTGATGGTACTATCTCTGACACAGATAGTGAAAATTTGTCCACATCTTCAGCAAGCTTGCGATTTCAGCCGTGGATTACAGATCTATTTTTGCATAAACAATCATCTCAACGTGAAGAAGAAAGATCAGAGAGTTCTCGTTCTCATGCTAGGCTTGAAACGTCTACAACTAGAGCTTTGCTAGAAAAGTTCTCCAGGCTTGACAGAGAAGCTGAAATTGAAACCTCGACCTTTAAGGCTGACTTGGAATTCAGTGGAAGCATAAGAGAAGTGGTAGCATTATCTAGAAACGCCGCACCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCTGTTTTTGGAAAACCTCCAAGATGGTTCAGCTATGCTGAGTTGGAGCTAGCTACTTGTGGATTTTCACCGGCCAATTTCTTGGCAGAAGGAGGATATGGATCTGTTCACAGAGGGGTTCTACCAGAGGGGCAAGTTATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTCTGCTCGGAGGTTGAAGTCCTGAGTTGTGCTCAGCACCGAAATGTTGTTATGTTGATCGGGTTCTGTATAGAGGATAAAAGAAGGTTATTGGTTTATGAATACATATGCAATGGATCATTGGATACTCATCTATATGGGAGACAACGGAAACCATTAGAATGGTCTGCACGTCATAAAATTGCTGTTGGTGCTGCTCGAGGTTTGCGATATCTTCATGAAGAATGCAGAGTGGGATGCATCGTCCACCGTGACATGCGGCCTAACAACATTCTTATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTAGCAAGGTGGCAGCCTGATGGAGACACTGGAGTGGAAACTAGAGTTATTGGGACATTCGGGTATTTGGCTCCCGAATATGCTCAAAGTGGACAAATAACTGAAAAGGCTGATGTATATTCTTTCGGAGTTGTATTAGTGGAGCTTGTGACTGGGCGTAAAGCTGTGGATATCAACCGGCCTAAGGGACAGCAGTGTCTTACCGAGTGGGCACGACCACTATTAGAAGAGTATGCCATTGAGGAACTGATTGATCCAAGGTTGGGAAGTCACTATTCAGAAGACGAGGTCACTTGCATGCTACATGCGGCATCCTTATGCATAAGGCGAGATCCTTATTCCAGACCACGCATGTCACAGGTTTTGCGAATACTAGAGGGCGACACAGTCATGGAATCACCACGCCATTTCAGAGTTTCCCCTTCCCTTTGA 2085 0.4355 MSREQPKRGKHEKVCDGAKKVIVAVKASKEIPKTALVWSLTNVVQPGDCITLLVVVPSQSSGRKLWGFPRFAGDCANGHKKSTILGASSEQKNDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVFDKNLKHEEKQCMEELQCNIAGMKGSQPKVLRFNLVGSQKKDLEETCSLPSEQHDMPGKQSKKKNGSLKSTIGQVVTPTSSPELETSFTATEVGTSSVSSSDPGTSPFFVSEIIAESKKEETIIENQETDGTISDTDSENLSTSSASLRFQPWITDLFLHKQSSQREEERSESSRSHARLETSTTRALLEKFSRLDREAEIETSTFKADLEFSGSIREVVALSRNAAPGPPPLCSICQHKAPVFGKPPRWFSYAELELATCGFSPANFLAEGGYGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDTHLYGRQRKPLEWSARHKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDINRPKGQQCLTEWARPLLEEYAIEELIDPRLGSHYSEDEVTCMLHAASLCIRRDPYSRPRMSQVLRILEGDTVMESPRHFRVSPSL* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4852 694 ProSitePatterns Tyrosine protein kinases specific active-site signature. 527 539 IPR008266 GO:0004672|GO:0006468
Tpr7g4852 694 MobiDBLite consensus disorder prediction 206 227 - -
Tpr7g4852 694 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 684 - -
Tpr7g4852 694 Gene3D Transferase(Phosphotransferase) domain 1 482 690 - -
Tpr7g4852 694 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Tpr7g4852 694 MobiDBLite consensus disorder prediction 304 322 - -
Tpr7g4852 694 SUPERFAMILY Protein kinase-like (PK-like) 390 679 IPR011009 -
Tpr7g4852 694 MobiDBLite consensus disorder prediction 190 227 - -
Tpr7g4852 694 PANTHER OS01G0253100 PROTEIN 16 684 IPR045271 GO:0004714|GO:0006468
Tpr7g4852 694 CDD STKc_IRAK 412 678 - -
Tpr7g4852 694 Pfam Protein tyrosine and serine/threonine kinase 412 675 IPR001245 GO:0004672|GO:0006468
Tpr7g4852 694 ProSiteProfiles Protein kinase domain profile. 406 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4852 694 MobiDBLite consensus disorder prediction 304 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4852 Tpr-Chr7 56494583 56499780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4852 386 679 Trihelix Transcription Factor Family AT1G70460 52.824 4.81e-99 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tpr7g4852 Pkinase 3.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4852 - - gmx:100789216 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4852 7 56494583 56499780 Tpr7g4852 7 56494583 56499780 ECH
Tpr7g4852 7 56494583 56499780 Tpr5g2412 5 45750232 45756211 PCT