Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4826 ATGGCATCTTCATCATCTTCACATCATGTTCCTCAAATTAAATATGATGTATTCATTAGCTTTAGAGGCACAGACATACGTCATGGTTTTTTAGGCCATTTGAGAAAAGAATTGAGGCAAAAGCAAGTTGATGCCTATGTGGATGATAGACTTGAAGGAGGAGAAGAAATAACACAAGCACTTGTTAAAGCCATTGAAGGATCACTTATTTCTTTGATAATATTTTCCAAGGACTATGCTTCTTCAAAGTGGTGTTTGGAAGAGCTTGTTAAAATTATTCAATGTATGGCTAGAAATAAACAAATTGTCATCCCTGTTTTCTATAATGTTAATCCAACGGATGTAAGGCACCAAAAAGGGACTTATGCTGATTCATTTGCTAAACATGAAATAAATAATGTAAGCTTAGCTAAGGTGCAAAATTGGAGATCTGCTTTGACTATTGCTTCTAATCTTTCTGGATTTCATTCATCAAAATTTGGGGATGAAGTTGAGCTTATAGAAAAAATTGTCAAATATTTGTCATCCAAGTTGAATGTTATGTACCAAAGTGAGTTAACAGATCTTGTTGGAATTGAACAAAGGATTGCAGATTTAGAGTCACTGTTATGCCTAGATTCAACTGTAGATGTTCTTGTCGTTGGCATTTGGGGTATGGGCGGTATTGGCAAGACAACTCTTGCAGCTGCAGTGTATAACCGTCTTTGTTTTGAATATGAAGGATGTTGCTTTATGGCAAATATTACAGAAGAATCAGAGAAGCATGGAATGATTTATCTGAAGAATAAAATTCTCTCTATATTGCTAAATGAAAATCATCTACATATCGGTACACCTAATGGAGTTCCACCTTATGTTAAAAGAAGGTTGGTTCGTAAAAAAGTTCTTCTTGTTCTTGATGATATCAATGATTTAGAGCATCTAGAGAATTTAGTTGGAGGACTTGATTGGTTTGGATCCGGTAGCAGAATCATCGTAACAACCAGAGATAAGCAAGTGCTTGGTAAAAGAGTCAATTGTATATACGAGGCCAAGGCATTGGAGTCTGATGATGCTATTAAACTTTTCATCACAAATGCCTTCAAAAATGGTTGTCTTGACATGGAATGGATTGAGCTATCAAGAAGGGTGATTCATTATGCTAATGGAAATCCATTAGTTTTGAAAGTTTTGGGTTCTTTTCTTTATGATAAAAGCAAACTAGAATGGGAAAGTCAGTTGCAGAAACTTAAGAAGATGCCTCATGCAAAAATTCAAAATGTATTGAGATTGAGTTATGATAGACTCGATCGAGAAGAGAAGAACATATTTTTATATATTGCATGTCTGTTGAAAGGATATGAAGTTCAACAAATAATAGCTTTGCTTGATGCTTGTGGTTTCTCAACAATTATTGGGTTAAAAGTCCTTAAAGACAAAGCCCTTATAATTGAAGCCAAGGGCGCTGGAAAATCAATGGTTCTGATGCATGACTTGATACAAGAAATGGGCTGGGAGATTGTTCGAGAAGAATGTATTGAAGACCCTGGAAAACGCAGCAGGTTATGGGATCCTAATGATGTTCATCAAGTATTGACAAATAACACGGGAACTAAAGCCGTCAAAAGCATAACTCTGAATGTCTCGAAATTTGATGAGCTGCAGTTAAGTCCTCAAGTCTTCGGTAGGATGCAGCAGTTAAAATTTCTTAAATTTACCCAACATTATGGCGACGAGAAAATACTGTATCTTCCTCAGGGTCTTGAATCTTTGCCAAATGACCTACTGCTTTTTCAATGGAATATTCAACATTTAAAGAAAATGGACCTCAGTTATTCCAAATATCTGCTAGAGCTCCCTGATTTTTCAAAGGCCTCAAATCTTGAAGAAATAGAACTCTATGGCTGCAAAAGTTTGCTTAATGTTCATCCTTCAATTTTACGTCTCAACAAGCTAGTGCGACTGAACCTATTTTACTGCAAAGCACTTACCAGTCTTCGAAGTGATACTCATTTAAGATCCCTTCGCGATCTATTCCTCGGTGGTTGCTCAAAACTCAAGGAGTTTTCAGTGACATCTGAGAATATGAAAGACTTAACTTTAACTTCAACAGCTATCAATGAATTGCCCTCATCAATTGGTAGTCTCAAAAAACTCGAATCATTGAGTCTTGATTTCTGCAAAAGCCTAATCAACCTTCCAAATGAAATTACCGACCTGAGATCACTTCGAGCTCTTTACATTCACGGTTGCACACAACTTGATGCATCAAATCTTCATATCCTAATTAGTGGTTTAGCTTCTTTAGAAACGTTAAAGCTGGAAGAATGTCGTAACTTATTCGAAATTCCAGACAACATCAGCTTCCTATCATCATTGCGTGAGTTGTTACTAAAAGAAACTGATATTGAGATATTTCCTGCAAGCATCAAGCATCTTTCTAAGCTGGAAAAACTTGACATAAAGGGCTGCAGGAGGCTTCATTATCTTCCAGAGCTTCCGCCATCACTGAAAGAGTTTTATGCCACTAATTGTTCATCTTTAGAGACTGTGATGTTCAATTGGAATGCTGCTGATCTACTACAACATCAAGCATATAAGTTATATACACGATTTGAAAATTGTGTTAACTTGGATGAACTTTCACTCAGGGCAATTGAAGTAAATGCTCAAGTAAACATGAAGAAATTGGTATATAAGAATCTCTCAACATTAGGAAGCAAATTTCTTGATGGTCCAGTTGATGTGATCTACCCCGGAAGTAAAGTTCCAGAGTGGTTTATGCACAGAACAACACAGGCTTCAGTGACTGTTGATTTCTCTTCCGCTCCAAATTCCAAGTTTGTTGGTTTCATCTTCTGCGTCATTGCTGGTCAGCTCCCATCGGACGATAAAAACTTCATTGGATGTGACTGTTACCTGGAAACTGGTAATGGCGAAAGGGTCGCTCTTGGGAACATGGATACATGGACTAGTATACATTCCCCCGAGTTTTTTTCCGACCATGTTTTTATATGGTATGATGAAATGTGTTGTCTGCAAAACAGTGAACCCAAAAAGGAAAACGTGGAAGAACTCATGGCCAATTATAATCCAAAGGTTTCATTTGAATTCTTTGCTCAAAGTGGAAATACTTGGGAAAAGAGAGAGAGTAGTATGATAAGAGGGTGTGGAGTGTGTCCAATATATGATACAGAATATTTTGATTTCATTAAACAAATGGAATTGGAGTTGGAATTCACACTGCAATCCATTGCTAATGAAAGGTTAGTTCAATGCAGTGATAAGAAAGAAACACTAGACCCAAAACAACCATGCAAGAAATTCTTTTCACACGTTCAAACTGGAATTTGGAAGAGTGCAACACAAGGCTTGAAAGATATATTGTTGTGA 3372 0.3674 MASSSSSHHVPQIKYDVFISFRGTDIRHGFLGHLRKELRQKQVDAYVDDRLEGGEEITQALVKAIEGSLISLIIFSKDYASSKWCLEELVKIIQCMARNKQIVIPVFYNVNPTDVRHQKGTYADSFAKHEINNVSLAKVQNWRSALTIASNLSGFHSSKFGDEVELIEKIVKYLSSKLNVMYQSELTDLVGIEQRIADLESLLCLDSTVDVLVVGIWGMGGIGKTTLAAAVYNRLCFEYEGCCFMANITEESEKHGMIYLKNKILSILLNENHLHIGTPNGVPPYVKRRLVRKKVLLVLDDINDLEHLENLVGGLDWFGSGSRIIVTTRDKQVLGKRVNCIYEAKALESDDAIKLFITNAFKNGCLDMEWIELSRRVIHYANGNPLVLKVLGSFLYDKSKLEWESQLQKLKKMPHAKIQNVLRLSYDRLDREEKNIFLYIACLLKGYEVQQIIALLDACGFSTIIGLKVLKDKALIIEAKGAGKSMVLMHDLIQEMGWEIVREECIEDPGKRSRLWDPNDVHQVLTNNTGTKAVKSITLNVSKFDELQLSPQVFGRMQQLKFLKFTQHYGDEKILYLPQGLESLPNDLLLFQWNIQHLKKMDLSYSKYLLELPDFSKASNLEEIELYGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTHLRSLRDLFLGGCSKLKEFSVTSENMKDLTLTSTAINELPSSIGSLKKLESLSLDFCKSLINLPNEITDLRSLRALYIHGCTQLDASNLHILISGLASLETLKLEECRNLFEIPDNISFLSSLRELLLKETDIEIFPASIKHLSKLEKLDIKGCRRLHYLPELPPSLKEFYATNCSSLETVMFNWNAADLLQHQAYKLYTRFENCVNLDELSLRAIEVNAQVNMKKLVYKNLSTLGSKFLDGPVDVIYPGSKVPEWFMHRTTQASVTVDFSSAPNSKFVGFIFCVIAGQLPSDDKNFIGCDCYLETGNGERVALGNMDTWTSIHSPEFFSDHVFIWYDEMCCLQNSEPKKENVEELMANYNPKVSFEFFAQSGNTWEKRESSMIRGCGVCPIYDTEYFDFIKQMELELEFTLQSIANERLVQCSDKKETLDPKQPCKKFFSHVQTGIWKSATQGLKDILL* 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4826 1123 Pfam NB-ARC domain 200 426 IPR002182 GO:0043531
Tpr7g4826 1123 Gene3D Ribonuclease Inhibitor 532 688 IPR032675 -
Tpr7g4826 1123 Gene3D Ribonuclease Inhibitor 689 895 IPR032675 -
Tpr7g4826 1123 Gene3D - 346 430 IPR042197 -
Tpr7g4826 1123 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 603 742 IPR044974 GO:0006952
Tpr7g4826 1123 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 594 IPR044974 GO:0006952
Tpr7g4826 1123 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 709 1069 IPR044974 GO:0006952
Tpr7g4826 1123 SUPERFAMILY L domain-like 489 878 - -
Tpr7g4826 1123 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 10 594 - -
Tpr7g4826 1123 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 603 742 - -
Tpr7g4826 1123 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 709 1069 - -
Tpr7g4826 1123 SMART till_3 14 152 IPR000157 GO:0007165
Tpr7g4826 1123 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 440 IPR027417 -
Tpr7g4826 1123 PRINTS Disease resistance protein signature 213 228 - -
Tpr7g4826 1123 PRINTS Disease resistance protein signature 289 303 - -
Tpr7g4826 1123 PRINTS Disease resistance protein signature 381 395 - -
Tpr7g4826 1123 PRINTS Disease resistance protein signature 804 820 - -
Tpr7g4826 1123 Pfam TIR domain 14 191 IPR000157 GO:0007165
Tpr7g4826 1123 CDD AAA 190 330 - -
Tpr7g4826 1123 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 155 IPR035897 -
Tpr7g4826 1123 ProSiteProfiles TIR domain profile. 13 178 IPR000157 GO:0007165
Tpr7g4826 1123 Pfam C-JID domain 911 1059 IPR045344 -
Tpr7g4826 1123 Gene3D - 10 179 IPR035897 -
Tpr7g4826 1123 Gene3D - 180 340 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4826 Tpr-Chr7 56265956 56273217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4826 15 819 WRKY Transcription Factor Family AT4G12020 31.770 8.45e-105 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4826 - - ccaj:109805840 1734.15