Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4820 ATGGGTGCTTCTGGAAAATGGTTTAAATCACTTCTTCCTCATAAAAAAACCTCAACCTCATCAACAATTGATCAAGAGAAGAAGTTTAATGGTGATAACAAGATTAGTAGTACTAAGAAAAAATGGAAGCTATGGAAGACAACTTCAGAAGGGTCTTCTTCTTCTTCAACCTCCTGTATGAGCAAGAGTGGTGCTGCTGTGTATGATTCTTCAGTGACTGCTACTGCTGCTGCTTTGGCTGTTGTTGTTCGAGCTCCGCCTAAAGATTTCATCATCATCAGACAGGAATGGGCTGCTATTCGTATTCAGGCCGTGTTTCGAGCTTTCTTGGCAAGAAGAGCTTTGAGGGCATTGAGGGCAGTGGTGAGGCTGCAAGCTATATTTAGAGGCAGGCAAGTGAGAAAACAAGCAGCTGTTACTCTAAAGTGCATGCAAGCTCTTGTTAGGGTTCAGGCACACGTAAGGGCTAGGAATGTTAGGAACTCTCCAGAAGGCAAAGCAGTGCAGCAGCTAATCGACGACCATCGCAACCAAGCTGATTCTGTCAAACTTGTAGAGCAAGGATGGTGCGAAATTCCTGGAACTGCGGATGAAATTAAAGCAAAGCTAAGAATGAGGCAAGAAGGAGCTATCAAGAGAGATAGAGCAATGGCATACTCTCTATCCGCACAGTCAAGAATCAGTGCTAGTCCAAACTCAAAAGTCGCAACAAAATCAATGACTCTTCTCAAGCATCATCACAACCTTGACAATAACAAGAGCTTAGGAAATAGCTTGTTAGAACGCTGGATGTCGACCAAACCATGTCCATGGGAGAGTCCAATATCAAGCAGGAAGAGTGAAGAACTTGTTTCTAATTTTCAATCAAGAAGGAATGGTGTAACAACTAGGATTTCAGCTCTTAAAATCTGTCAGCAAACTCCATCATCTTCGACAATAAGCTCCGAATACATGAATGATGATAGCCTTAGATCAACTTCAAGTACATCTGAATCTCCATCTATGCCATTCACCAATACTGTTATGGCGGAAACAGGTGAAGAAAAAGATGTTCATCTACCTAGCTACATGAATTTAACAGAATCAACTAAGGCTAAATTCAAAGGTTATAGGTCTACTTCGCAGAATTCAAAGAGACTCGCAATGGACGATTGTATGTCTCATAACACAAGTTCAACCTTTCTGAATGGATATAATAGTATAAGCAGTTCTGGTTCTGATCCTTCGGTTAATCCATGGAAGGATCGTTGCACAACGCCACTAAGGGCAAGCTATTATCAAAAGCGATATGGCAGGAGATAG 1302 0.4178 MGASGKWFKSLLPHKKTSTSSTIDQEKKFNGDNKISSTKKKWKLWKTTSEGSSSSSTSCMSKSGAAVYDSSVTATAAALAVVVRAPPKDFIIIRQEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRQVRKQAAVTLKCMQALVRVQAHVRARNVRNSPEGKAVQQLIDDHRNQADSVKLVEQGWCEIPGTADEIKAKLRMRQEGAIKRDRAMAYSLSAQSRISASPNSKVATKSMTLLKHHHNLDNNKSLGNSLLERWMSTKPCPWESPISSRKSEELVSNFQSRRNGVTTRISALKICQQTPSSSTISSEYMNDDSLRSTSSTSESPSMPFTNTVMAETGEEKDVHLPSYMNLTESTKAKFKGYRSTSQNSKRLAMDDCMSHNTSSTFLNGYNSISSSGSDPSVNPWKDRCTTPLRASYYQKRYGRR* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4820 433 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Tpr7g4820 433 Pfam IQ calmodulin-binding motif 119 136 IPR000048 GO:0005515
Tpr7g4820 433 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Tpr7g4820 433 MobiDBLite consensus disorder prediction 310 335 - -
Tpr7g4820 433 Gene3D - 93 143 - -
Tpr7g4820 433 PANTHER IQ-DOMAIN 5-RELATED 1 431 - -
Tpr7g4820 433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 137 IPR027417 -
Tpr7g4820 433 SMART iq_5 94 116 IPR000048 GO:0005515
Tpr7g4820 433 SMART iq_5 117 138 IPR000048 GO:0005515
Tpr7g4820 433 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Tpr7g4820 433 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4820 Tpr-Chr7 56233194 56236153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4820 1 415 IQD Protein Family AT1G72670 43.021 4.08e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4820 - - mtr:MTR_2g099780 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4820 7 56233194 56236153 Tpr5g2349 5 45002833 45006552 PCT