Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4807 ATGGTTTCCATTCTTATTGCCATTGATAAAGACAGCAATAGCAAACATGCTGTAAGATGGGCTGTTGATCGTCTCTTGGACAAGAACTCATCATGTACCCTAATTCACGTTAGAACCAAGTCCCTTAATTCAAGTGAATTTGATGTTGTTCCTAAACATGGTCGTGCACCAACTGAAGAAGAATTGCATCGGCTTTTTCTTCCTTTCCGAGGATTTTGTGCTCGAAAAGGGATCATAGCAAAGGAGTTGGTTCTTCATGACATTGATGTTTCAAGTGCACTAACTGATTACATCACTGACCACTCTTTCAGCAATGTTGTCGTTGGTGCTCCCCGCTGGAATAATGCTTTTATAAGGAGATTTAAAGATGTAGATGTGCCAACAAACTTAATCAAGTCTCTACCAGAGACTTGCATGGTGCATATTATATCGAAAGGAAAAGTGCATAGTATTCAAGCAACAGCTCCTGCTCAAACCATTACTATTTCTAGTCCAAAGCCAAATTATTTGTCCAAAGAATTTAACAGAACATCATTATCACGGCGGCGCTATAGCAATGATGGTGGATCCTTTAGTCAAAACAAAGATGCAAGAGTATCAAGAAGATGTAAGTCCCAAAGAGAGTTTTGTCCATCAAGGAGAGCACTAAGCCAAGATGCATTTATATATAAAAGCATATCTACTAAAGTATCGCCGACTAGCATGGAGACGAAGACAACAACAAAGTGTAAGTCGGCATCAGTCAGTAGAGAACTTGGTTTGGCGAAACAGAAGGTAATTAATTAATGAATTCATGAAGAATCTGTTGATGAAGAAGTAATAACATTAAATGTAATTGAACAAAACAAATATATATTTAAAAGATACAATATTGAACAAATTGAAGTTGCAACAAATTACTTTGATCCTGATGGCAAAATTGGTGAAGGTGGATATGGACCTGTTTTCAAAGGTGTGCTTGATAACCATGTTGTTGCAGTTAAGGCCTTAAGACCAGACTTGACTCAAGGAGAGAAACAATTTCATCAAGAGGTCCTTGTTTTAGGCTCCATAAGACACCCCAACATTGTAGTACTTTTAGGTGCATGTCCGGAGTATGGATGCCTCGTATACGAGTACCTAGAGAACGGAAGCTTAGAAGATCGCCTTTTTTGTAAAGATAACACACCGCCAATTCCATGGAAGACTCGTTTCAAAATAGCATCAGAGATTGCCACAGGTCTTCTATTCCTTCACCAGACAAAACCAGAACCGGTTGTGCATCGCGATCTAAAGCCAGCAAACATTCTGTTAGACAGAAACAAAGTGAGCAAGATCACTGATTATGGTTTGGCAAGGCTTGTTCCACCTTCTATCGCCAACAAAACCACTCAATATCACAAGACAACTGCAGCCGGCACTTTATGCTATATCGATCCGGAGTATCAACAAACGGGACTATTAGGCGTAAAATCAGACATATATTCATTAGGCGTGATGCTGTTACAGATCATTACCGGAAAGCCTCCAATTGGTGTGGCTCATCTTGTTGAGGAGGCCATTCAGAATAATACTTTTGCAGAGGTTTTAGATCCGAATGTGACCGATTGGCCGGTTGAAGAAACTTTATCATATGCTAAAATGGCTTTGAAGTGTTGTGAAATGAGAAAAAGGGATAGACCAAATCTTGCTACTGTCATTTTGCCAGAACTGATTAGACTCAGAGATCTATAA 1713 0.3935 MVSILIAIDKDSNSKHAVRWAVDRLLDKNSSCTLIHVRTKSLNSSEFDVVPKHGRAPTEEELHRLFLPFRGFCARKGIIAKELVLHDIDVSSALTDYITDHSFSNVVVGAPRWNNAFIRRFKDVDVPTNLIKSLPETCMVHIISKGKVHSIQATAPAQTITISSPKPNYLSKEFNRTSLSRRRYSNDGGSFSQNKDARVSRRCKSQREFCPSRRALSQDAFIYKSISTKVSPTSMETKTTTKCKSASVSRELGLAKQKVIN**IHEESVDEEVITLNVIEQNKYIFKRYNIEQIEVATNYFDPDGKIGEGGYGPVFKGVLDNHVVAVKALRPDLTQGEKQFHQEVLVLGSIRHPNIVVLLGACPEYGCLVYEYLENGSLEDRLFCKDNTPPIPWKTRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDRNKVSKITDYGLARLVPPSIANKTTQYHKTTAAGTLCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPIGVAHLVEEAIQNNTFAEVLDPNVTDWPVEETLSYAKMALKCCEMRKRDRPNLATVILPELIRLRDL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4807 568 PANTHER OS02G0152300 PROTEIN 248 568 - -
Tpr7g4807 568 PANTHER OS02G0152300 PROTEIN 4 259 - -
Tpr7g4807 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Tpr7g4807 568 ProSiteProfiles Protein kinase domain profile. 299 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4807 568 Gene3D Phosphorylase Kinase; domain 1 277 371 - -
Tpr7g4807 568 Pfam Universal stress protein family 4 115 IPR006016 -
Tpr7g4807 568 CDD STK_N 3 146 - -
Tpr7g4807 568 Gene3D Transferase(Phosphotransferase) domain 1 372 567 - -
Tpr7g4807 568 SUPERFAMILY Protein kinase-like (PK-like) 279 558 IPR011009 -
Tpr7g4807 568 Gene3D HUPs 2 141 IPR014729 -
Tpr7g4807 568 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 248 568 - -
Tpr7g4807 568 SMART serkin_6 299 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4807 568 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 3 113 - -
Tpr7g4807 568 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 259 - -
Tpr7g4807 568 Pfam Protein kinase domain 302 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4807 Tpr-Chr7 56092965 56095970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4807 256 568 Receptor kinase-like Gene Family AT5G12000 64.217 1.28e-146 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr7g4807 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4807 - - gmx:100802306 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2308 5 44264467 44268238 Tpr7g4807 7 56092965 56095970 PCT