Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4791 ATGGAATACCCTTTTTACCCTAAGGGAAGAGGAATTGGGTATTGGCAGTCTCCTGGAACTCAGTTGGAAGAATCAAGATCATTAGATGGTGGAATCAGCAATTTGGGGTCAGAGGATATGCCTAGCAGCTTCTCCGAGCTCATGAACTTTGATACTTATGCTGGTTTGTGTTCTGGCCCATCCATGACTGATCAGATTATGGCTAATGAGCTTCCGTCTCTTGCCTCGGTATTATATCAATCGCCTGATGAATTCAATCTAGTAGAACAAAACACTGGACAATTCTATATGACAGGAGTCAGTGGAAATTACAATAACTCGGAAAGCTCCCCCATTTTTGGGGAGAAAATTGTGCGTCAACAGATGGATAGCCTACTTGATTTATTAGACAACAACAATGATGCAAATAACTTAAGTTCTAAGCAAAAAATTAACGACTCTTCACAGCATGTTAATACTTTTGACATGGACAATTGCATAATCTCCAAGCCACCTGATTTGTCACTTGATGAGAGAATGCTGAAAGCCCTGTCCTTCTTTAAAGAATCAGCTGGTGGGGGAATATTGGCACAAGTTTGGGTACCGATAAAGCATGGTGGTCAAGTTTACTTAAGCACTAGTGAGCAACCTTATTTACTAGATCAAATGCTTGCAGGGTATCGTGAAGTATCAAGGACATTTACATTTTCTACAGAAGGAAAACCAGGTTTTTTACCAGGACTTCCTGGTCGTGTGTTTATCTCCAAAGTTCCCGAGTGGACTTCCAATGTTGGTTACTACAGTCCAAGTGAGTATTTGAGGGTTGAGCATGCAAGAAATCATGATGTTCGTGGATCAATTGCGTTTCCCATATTTGATCTGCACTCTGGACTGCCATGTTGTGCTGTCTTGGAACTTGTCACTACGAAGGAAAAACTTGATTTTGACAGAGAATTGGAAATTATTTGTCGTTCACTTCAGCTTGTAAATTTAAGGACTACGATGCCTTTTCGGCTGCTTCCTGAGTGTCTTACGAATAATAAAAGAGCTGCTTTAACAGAGATAGTTGATGTGTTAAGATCTGTGTGTCATGCACATAGATTGCCACTGGCACTAACATGGATTCCCTGTTTTTACAATGAGGGCACAAGAGATGAAACTACTAGAATACAAATTAAAGAGGGTAATTCAAGTTCTAGAGAAAAAAACATACTGTGTATTGAAGAATCAGCTTGCTATATAACTGATAGAGCGATGGAAGGATTCGTGCATGCATGCATTGAACATCCTCTTGAGGAAGGGAAAGGTGTAGCTGGGAAAGCACTTCAATCAAACCATCCTTTCTTCTATTCTGATGTGAAAACATATGATATTAGTGAGTATCCGCTTGTTCATCATGCACGCAAGTTCAATTTGAATGCTGCAGTTGCAATCAGGCTAAGGAGTACTTATACTAATAATGATGATTACATATTGGAATTCTTTCTGCCTATCAATATGAAGGGGAGTTCAGAACAGCAACTTTTATTAGACAACCTCTCAGGTACCATGCAGAAAATTTGTAAGAGTTTGAGGACAGTTTCAGGTGCCGAACTATCAGAAATGGAAAGCTCTCAGGAAGGGTTTGAAAAGAACAGTGTCCCAAGTTTTCCCCCCTCGTCTAAGAGAAAATCTCCAACACCATTTATAAATGAAAGCCATGGTTCCGTCAAGAAGCTGTCGTCAAAGGCTTCTAACCTGAGAAACAATGGAAATGAGCCTTCTCCTAACCAGGAAAGAAATGCACCGAAAAGACGAGCTGAGAAATATAGAAGTTCATCCGAGAAGAATGTTAGCTTGAGTGTTCTCCAACAATACTTTTCTGGTAGTCTGAAGGATGCTGCAAAAAGCATTGGCGTTTGCCCGACAACTCTGAAAAGGATATGCAGGCATCACGGAATTTCAAGATGGCCATCCCGCAAGATTAATAAAGTGAATCGTTCTTTGAAGAAAATTCAGACTGTGCTTGACTCTGTCGAGGGAGTTGAAGGTGGGTTGAAGTTTGATCCTTCCGTGGGGGCATTTGTGGCAAAAGGGACAGCCATCCAAGAAATTGATGAAAATAGAAGCCTCCCTTTCCCCGAGAAAAGTACTACAGAAGACTCTGAGCCGTTTTCACAAGATGCTGCCTCAGTGCCTCTTGCACATTGTAGTGACGGTGAGAATTCAGCAAATAAGTTGGATGAGAAATTGAAGGAAACCAATGCATCTTTGATTGATTGCAGTGAAGATTCAAAATCATTTGCAATGGATGATTGTCCTGAACAAGCTTGTTTTGGTTCCGTTCTTGGAAAAGGTGATCAGTGGGTTCTGAACAAGGGTGGTTTGAGAGAAGAAGAAAAATGTAAACATAATACTATTGGCAAGAGGACAAGTTCCTTTGTTGTTTATGAGATGGACACTGGTGTGGATGGGGATGATGAGGCTGTTGAGAACAACAATCCTGCTTCTTCAAGCTTGACAGGCTCGTCTAATAGCTCTGGTTCAATCGTACATGACAGTTCATCAGGTTACCAGAACCTTAAGAACCAAAAGCAGTCCAAAAGCAAATCAATCATCGTCGATAGCGGGTCAAAAATCGTTGTGAAAGCTACTTACGGAGAAGACACCATTCGTTTCAAGTTTGATCCAGCCACAGGTTGTTTAAAACTATATGAAGAAGTTGCATCAAGGTTCAAACTGCGAAACGGGACATTCCAGCTCAAATATCTAGACGATGAAAAAGAATGGGTGATGTTAGTGAACCACTCAGATTTACAAGAGTGTTTGGAAATATTGAATGATATGGGGACACGTAATGCAAGGTTTCTTGTTCGCGATACGCCTTGTACTTTTGGCAGCTCTGGTAGTAGCGTGTGCTACTTGGGAGGCAGCTCATAG 2898 0.4106 MEYPFYPKGRGIGYWQSPGTQLEESRSLDGGISNLGSEDMPSSFSELMNFDTYAGLCSGPSMTDQIMANELPSLASVLYQSPDEFNLVEQNTGQFYMTGVSGNYNNSESSPIFGEKIVRQQMDSLLDLLDNNNDANNLSSKQKINDSSQHVNTFDMDNCIISKPPDLSLDERMLKALSFFKESAGGGILAQVWVPIKHGGQVYLSTSEQPYLLDQMLAGYREVSRTFTFSTEGKPGFLPGLPGRVFISKVPEWTSNVGYYSPSEYLRVEHARNHDVRGSIAFPIFDLHSGLPCCAVLELVTTKEKLDFDRELEIICRSLQLVNLRTTMPFRLLPECLTNNKRAALTEIVDVLRSVCHAHRLPLALTWIPCFYNEGTRDETTRIQIKEGNSSSREKNILCIEESACYITDRAMEGFVHACIEHPLEEGKGVAGKALQSNHPFFYSDVKTYDISEYPLVHHARKFNLNAAVAIRLRSTYTNNDDYILEFFLPINMKGSSEQQLLLDNLSGTMQKICKSLRTVSGAELSEMESSQEGFEKNSVPSFPPSSKRKSPTPFINESHGSVKKLSSKASNLRNNGNEPSPNQERNAPKRRAEKYRSSSEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRHHGISRWPSRKINKVNRSLKKIQTVLDSVEGVEGGLKFDPSVGAFVAKGTAIQEIDENRSLPFPEKSTTEDSEPFSQDAASVPLAHCSDGENSANKLDEKLKETNASLIDCSEDSKSFAMDDCPEQACFGSVLGKGDQWVLNKGGLREEEKCKHNTIGKRTSSFVVYEMDTGVDGDDEAVENNNPASSSLTGSSNSSGSIVHDSSSGYQNLKNQKQSKSKSIIVDSGSKIVVKATYGEDTIRFKFDPATGCLKLYEEVASRFKLRNGTFQLKYLDDEKEWVMLVNHSDLQECLEILNDMGTRNARFLVRDTPCTFGSSGSSVCYLGGSS* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4791 965 ProSiteProfiles PB1 domain profile. 865 947 IPR000270 GO:0005515
Tpr7g4791 965 MobiDBLite consensus disorder prediction 819 844 - -
Tpr7g4791 965 Pfam RWP-RK domain 603 651 IPR003035 -
Tpr7g4791 965 MobiDBLite consensus disorder prediction 525 600 - -
Tpr7g4791 965 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 961 - -
Tpr7g4791 965 MobiDBLite consensus disorder prediction 585 599 - -
Tpr7g4791 965 SMART PB1_new 865 947 IPR000270 GO:0005515
Tpr7g4791 965 Pfam PB1 domain 867 946 IPR000270 GO:0005515
Tpr7g4791 965 Gene3D - 861 946 - -
Tpr7g4791 965 PANTHER PROTEIN NLP8 5 961 IPR045012 GO:0003700
Tpr7g4791 965 ProSiteProfiles RWP-RK domain profile. 585 671 IPR003035 -
Tpr7g4791 965 SUPERFAMILY CAD & PB1 domains 857 949 - -
Tpr7g4791 965 MobiDBLite consensus disorder prediction 525 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4791 Tpr-Chr7 56000162 56007427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4791 1 962 NLP Transcription Factor Family AT2G43500 48.103 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Tpr7g4791 PB1 9.8e-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4791 - - gmx:100804426 1320.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4791 7 56000162 56007427 Tpr7g4791 7 56000162 56007427 ECH
Tpr7g4791 7 56000162 56007427 Tpr3g2220 3 20804418 20810056 PCT