Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4771 ATGTATGGGAGAAAAGCTTGCCAACTTGTGAAAGAATTTGCAAGTGGAGAAAAGGGTCAGCTTACACCGTTTAATAATGACTTGTTTGACCAAGTAGTTGCAGAATGCAGCCAACATCACGGTGAGCTTCAGTCCTTGATAAGGAAGATGCAGGAAGAAGGTTTGGATGTCCAGACGGCAAGAAATGCTGACCACTACGGAGCCCTGATCCACCTATTTTCTATTGTCCGAAATAAACGTTGTCTAACGGCCTATGTGTATAACCGAGCAGAAACTATACGGAACTTGTTATGGAAGATAGGGCCTGTGATTCCTAAAGAAATTGAAGAGAAGCTTAATCATTGGGAGGAAGAGTATTTCAAGAAGAATTCTGCAGCATTGAAATCTTATATGTCAAAAGTGCTGGTTGATCTGACTGTGGATATGGTACCACCAAAAGATCCATACATACAAGTAAGGGTCCTTGAAGACATAAGAGAAGGCATTGTACTTAGTGATGATAAAAATCCCAACTTTGCCCGACATTCCATGCACTTTCTGAAACGAACTGATGCTGAGAAATATATCTCAAGGGGCTTAATGGAGGAGCTCACTGGTTGA 600 0.415 MYGRKACQLVKEFASGEKGQLTPFNNDLFDQVVAECSQHHGELQSLIRKMQEEGLDVQTARNADHYGALIHLFSIVRNKRCLTAYVYNRAETIRNLLWKIGPVIPKEIEEKLNHWEEEYFKKNSAALKSYMSKVLVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDDKNPNFARHSMHFLKRTDAEKYISRGLMEELTG* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4771 199 Pfam GINS complex protein 47 116 IPR021151 -
Tpr7g4771 199 PANTHER PARTNER OF SLD5 1 195 IPR005339 GO:0000811|GO:0006260
Tpr7g4771 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Tpr7g4771 199 Gene3D - 1 134 - -
Tpr7g4771 199 CDD GINS_A_psf1 3 134 IPR005339 GO:0000811|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4771 Tpr-Chr7 55850024 55854904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4771 1 199 Core DNA Replication Machinery Family AT1G80190 69.307 4.49e-103 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4771 K10732 - qsu:112021696 332.413