Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4750 ATGCCTAATGTATATTTTCACAATGTTGGTGATGATTGTGCTCGAAAGCCAAATCCCGAGGCTGTAGATGTCGATAGTTCTGAAGCAGGAGAAAAACTTGATTCAGTTCCTAAAAAAGAGGGCAGCGGAAAATCTGCTAGGGAGGACCAGATTCCGAATTCGCCACCTACTACAAAAAGCAAGATTGCTCGCAGAATCTTGATTGAGCCCGAGGATCAGCCTGTTGACATGGATGCAGATGATGATACCAATAATTTAGCAGCAGATGAATATCTTGATGAACTATACAATTTCTACAAGCTAACAGAAGAAGAAAATCGAGCTTCGGACTACATGGAATCACAGAGGGAAATCAATACTAAGATGAGGACTATTGTCGTGGACTGGTTGGTTGAAGTTCATCGTCATTTTAAATTGAAGACAGAGACACTCTTTCTTAACATTAACATAATTGATAGATACCTCTCATTGATTAATGTACCAAAAAAAGAGCTACAGTTAGTGGCAATATGTTCAATGTCCTTAGCTTGCAAATATGAAGAAGTGTCATATCCTAAGGTAAATGATTTGTTGGAGATATCAGATAAATTTTATAACAGACGCCAGTTTATTTCAAGGGAGAGAGATATTGTTGAAAAGCTTCAATGGAATTTTACAGTAACTACACCCTATGTATTTTTAGTTCGACTTATTAGAGCATCTATTGTTCAAGATAAAGAGATGGAGAACATGGCATTTTACCTAGCAGAACTTGGACTTGGAAATTATTATGTCATGGTATTATTCTCGCCTTCACAGATTGCTGCAGCAGCTGTTTACTCGGCTCGTTGTATACTCAATAGGATTCAATATTGGAATCAATATCTGCAGAACCTAGCTGGTTACTGCATAGAACAAATCAAAGATTGCGCGAAGCTATTAGTGAGGATATACGCAAGTGCAGCAGATGTTAAAACCAAATCAGTGTACAACAAATTCTCAAGTCCTAGGAAAGGTCACATTGCTCTTTTACCACAGCCGCGTAACATCGAAGAAAGATTGTAG 1044 0.3803 MPNVYFHNVGDDCARKPNPEAVDVDSSEAGEKLDSVPKKEGSGKSAREDQIPNSPPTTKSKIARRILIEPEDQPVDMDADDDTNNLAADEYLDELYNFYKLTEEENRASDYMESQREINTKMRTIVVDWLVEVHRHFKLKTETLFLNINIIDRYLSLINVPKKELQLVAICSMSLACKYEEVSYPKVNDLLEISDKFYNRRQFISRERDIVEKLQWNFTVTTPYVFLVRLIRASIVQDKEMENMAFYLAELGLGNYYVMVLFSPSQIAAAAVYSARCILNRIQYWNQYLQNLAGYCIEQIKDCAKLLVRIYASAADVKTKSVYNKFSSPRKGHIALLPQPRNIEERL* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4750 347 Gene3D - 108 213 - -
Tpr7g4750 347 SMART Cyclin_C_2 221 340 IPR004367 -
Tpr7g4750 347 CDD CYCLIN 219 308 IPR013763 -
Tpr7g4750 347 SUPERFAMILY Cyclin-like 84 218 IPR036915 -
Tpr7g4750 347 Pfam Cyclin, N-terminal domain 96 218 IPR006671 -
Tpr7g4750 347 Gene3D - 214 346 - -
Tpr7g4750 347 PANTHER CYCLINS 15 340 IPR039361 -
Tpr7g4750 347 Pfam Cyclin, C-terminal domain 222 339 IPR004367 -
Tpr7g4750 347 SUPERFAMILY Cyclin-like 222 341 IPR036915 -
Tpr7g4750 347 CDD CYCLIN 122 211 IPR013763 -
Tpr7g4750 347 PANTHER CYCLIN-B1-4 15 340 - -
Tpr7g4750 347 MobiDBLite consensus disorder prediction 1 59 - -
Tpr7g4750 347 MobiDBLite consensus disorder prediction 13 46 - -
Tpr7g4750 347 PIRSF Cyclin_A_B_D_E 8 346 IPR039361 -
Tpr7g4750 347 SMART cyclin_7 128 212 IPR013763 -
Tpr7g4750 347 SMART cyclin_7 225 309 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4750 Tpr-Chr7 55649781 55658178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4750 71 338 Core Cell Cycle Gene Families AT2G26760 47.388 5.51e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4750 K21777 - twl:120008028 318.161