Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4747 ATGGAGTCAGATCTTCATCAACAACAACAACAACCACAGGTAAATTCATCAGGTTTAACACGTTTCAAATCAGCACCAAGTTCATATTTCAACAACATAATTGATAAAGAATTTTATGAGCATGTTTTCAATCGACCTTCAAGTCCAGAAACAGAACGAGTTTTTTCAAGGTTTATGAATAGTTTAGGTTCAGAAGAAGATTTACTTACTCCAAAAATTTCAGCTGAATCTACTGTTAAACAAGAAGAAGTTATGGCTTCAATCAACAATGAACAAGTTGTTCATCAACAGAGTAATATGAATATGAATATGAATAATAATTATAATAACTCTGTTGTTACTCCTTCTCATGGTTTTTATCAAAGTTCAGTTATGCCACCTTTGCCAAATCAAAATGTTTCTTCTGGTTTGGATGGAAATTTTTCAATGGGAGTTAATCGGTTGCAACAAGTGAAGAATCATGGTGGAAATAATTCTAATCTTATTAGACATAGTAGTTCACCAGCTGGATTATTTTCTCAAATTAACATTGAAAATGGGTATGTTAGTATGAGAGGAATGGGAACAATAGGAGCTGTGAATAACTCAATAAAAGAAGCAAAATTTTCTAATGCAAGGAGTTTGAAGAATTCAACAAACTATTCATCAGGGATAATGTCAACAATAGCTGAAATTGGTGACAAAGATAATAGAGAAAATAATCAAGAAAGTGAAGCTTATGGTGAAAGTCATGGTAATGAGTATATGGATTATCAAGTTGATACTTGGGATGATTCTGAAATGATGTCTGAAAATGTTGGTGGTTTAAAAAGATTTAGAGATAATGATTCAAAACAACATTTTTCTGGTTTAAATGCAGCTACACTTCAGAATGAAACACGAGGAGGACATTCTTCATCTCCTTTGGCTCATCAATTGAGTATGCCAAATACTTCATCTGAAATGGCAGCTATGGAAAATTTTCTACATTTCTCTGATTCTGTTCCGATGAAAATTCGTGCTAAGCGAGGTTGTGCCACTCACCCTAGAAGCATAGCAGAAAGGGTTAGAAGGACTAAAATTAGTGAACGTATGAGGAAGCTACAAGATCTGGTCCCAAACATGGATAAGCAAACAAACACAGCAGATATGTTGGACTTGGCTGTAGATTACATCAAAGACCTACAAAAGCAAGCTGAGAAGCTTCAAGATTGTCAAGCAAAGTGTACCTGTCCACACAAGCAACAACAATAA 1233 0.3431 MESDLHQQQQQPQVNSSGLTRFKSAPSSYFNNIIDKEFYEHVFNRPSSPETERVFSRFMNSLGSEEDLLTPKISAESTVKQEEVMASINNEQVVHQQSNMNMNMNNNYNNSVVTPSHGFYQSSVMPPLPNQNVSSGLDGNFSMGVNRLQQVKNHGGNNSNLIRHSSSPAGLFSQINIENGYVSMRGMGTIGAVNNSIKEAKFSNARSLKNSTNYSSGIMSTIAEIGDKDNRENNQESEAYGESHGNEYMDYQVDTWDDSEMMSENVGGLKRFRDNDSKQHFSGLNAATLQNETRGGHSSSPLAHQLSMPNTSSEMAAMENFLHFSDSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQAEKLQDCQAKCTCPHKQQQ* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4747 410 Pfam Helix-loop-helix DNA-binding domain 343 389 IPR011598 GO:0046983
Tpr7g4747 410 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 407 - -
Tpr7g4747 410 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g4747 410 Gene3D - 339 409 IPR036638 GO:0046983
Tpr7g4747 410 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 338 388 IPR011598 GO:0046983
Tpr7g4747 410 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 7 407 - -
Tpr7g4747 410 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 341 402 IPR036638 GO:0046983
Tpr7g4747 410 SMART finulus 344 394 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4747 Tpr-Chr7 55627316 55630827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4747 5 404 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 38.129 1.12e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g4747 HLH 5.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4747 - - gmx:100805812 519.62