Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4743 ATGGGATCAATGAACACAAATAACTGGCTTTCATTTCCACTTTCTCCAACTCATCCTTCTTCATTACCACCTCATCTTCAACCAACTCAATCTCAATATCATCACTTTTCTCTTGGAACATTAGTCAATGACAACATGTTGGAAACCCCTTTCCAAAATCATGATTGGAACCTGTTGAGTACTAGTCATAGTCAGAGCAGCAATGAAGTTCCAAAGGTTGCTGATTTTCTTGGTGTGAGCAGCAAGATCAATACTGAAAATGAGTCAGATCTTGCAGCCTTTGATCATTCTTCAGATAATAATTACTTATTCATGCCAGCAATACATAATAACTCAGTTATAACAACTTCTAGCAACAGTTATGATCAATATCAAGAAAATGGTAACAATAATTTGCAGTCATTGACATTATCAATGGGAAGTGGTACTACTACTAAGGATTCCATATGTGAAACCAGTGTTGACACTAACAGTACAGTTGAAGCAGCTGCTACACCTAAAAGAGCTTTGGATACCTTTGGCCAAAGAACATCTATATATCGAGGCGTAACAAGACATAGATGGACCGGAAGGTATGAAGCTCATCTTTGGGATAATACATGTAGAAGGGAAGGACAATCAAGAAAAGGTCGCCAAGTCTATTTAGGTGGATATGACAAAGAAGAGAAAGCTGCAAGGGCTTATGATTTAGCTGCACTAAAGTATTGGGGGACATCCACCACTACAAATTTTCCAATAAGTAACTATGAGAAGGAAGTTGAAGATATGAAGCACATGACTAGACAAGAATTTGTTGCCGCCATAAGAAGAAAGAGCAGTGGATTTTCAAGGGGTGCATCAATGTATCGTGGAGTCACAAGGCATCACCAACATGGAAGATGGCAAGCAAGAATTGGCAGAGTAGCAGGAAATAAGGATCTTTACTTAGGAACTTTTGGTACCGAAGAAGAGGCTGCAGAAGCTTATGACATAGCTGCAATAAAGTTTAGAGGATTAAACGCAGTAACAAACTTCGACATGAATCGTTACGAGGTGAAAGCGATTCTTGAAAGTAATACTCTTCCAATAGGAGGAGGTGCTGCAAAACGGTTAAAAGAAGCTCAAGCTCTAGAATGTTCTAGAAAAAGAGAACAAGAGATGATAGCATTAGGCTCTAGTACTACTTTTCAATATGGAGGAATTGGAGGAGAAGGATCTTCAAGTTCAAGTAGGATGCAATTACAAGGTTACCCTTTAATGCAATTTGAACCTTTATATGAGAGTAGTATTCAAGATCCGTCGTCGTTTAATCAGCAGAGTTATATTCAAACTCAGCTTCAGTTGCATCAACAACAGCAAAGTGGAGGATTTTATAATTATAATGGGAATTACAATATTCAGAATCAGCAGGGTTTGATGAATATGGGTGTCATGGAGAATAATGGTGGTGGAGGAGGGTATATTGGGAATAATATTAACGTAGTTGGAAGTGGAGGGGAGGAGGTTGGGTTTGTTAAGGTTGATTATGACATGGCTTCCGGAGGTTATGGAGGTTGGTCAGCGGCCGATGCTTCAAATGTTGGTGCAGCCAGTGTTTTTACAATGTGGAATGATTTGACTAATTAA 1605 0.3894 MGSMNTNNWLSFPLSPTHPSSLPPHLQPTQSQYHHFSLGTLVNDNMLETPFQNHDWNLLSTSHSQSSNEVPKVADFLGVSSKINTENESDLAAFDHSSDNNYLFMPAIHNNSVITTSSNSYDQYQENGNNNLQSLTLSMGSGTTTKDSICETSVDTNSTVEAAATPKRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNTCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKEVEDMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGLNAVTNFDMNRYEVKAILESNTLPIGGGAAKRLKEAQALECSRKREQEMIALGSSTTFQYGGIGGEGSSSSSRMQLQGYPLMQFEPLYESSIQDPSSFNQQSYIQTQLQLHQQQQSGGFYNYNGNYNIQNQQGLMNMGVMENNGGGGGYIGNNINVVGSGGEEVGFVKVDYDMASGGYGGWSAADASNVGAASVFTMWNDLTN* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4743 534 CDD AP2 178 247 IPR001471 GO:0003700|GO:0006355
Tpr7g4743 534 SUPERFAMILY DNA-binding domain 280 340 IPR016177 GO:0003677
Tpr7g4743 534 Gene3D AP2/ERF domain 281 341 IPR036955 GO:0003700|GO:0006355
Tpr7g4743 534 Gene3D AP2/ERF domain 179 247 IPR036955 GO:0003700|GO:0006355
Tpr7g4743 534 Pfam AP2 domain 282 331 IPR001471 GO:0003700|GO:0006355
Tpr7g4743 534 Pfam AP2 domain 179 237 IPR001471 GO:0003700|GO:0006355
Tpr7g4743 534 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 7 530 - -
Tpr7g4743 534 SMART rav1_2 179 251 IPR001471 GO:0003700|GO:0006355
Tpr7g4743 534 SMART rav1_2 281 345 IPR001471 GO:0003700|GO:0006355
Tpr7g4743 534 PRINTS Ethylene responsive element binding protein signature 180 191 IPR001471 GO:0003700|GO:0006355
Tpr7g4743 534 PRINTS Ethylene responsive element binding protein signature 321 341 IPR001471 GO:0003700|GO:0006355
Tpr7g4743 534 CDD AP2 280 339 IPR001471 GO:0003700|GO:0006355
Tpr7g4743 534 SUPERFAMILY DNA-binding domain 178 247 IPR016177 GO:0003677
Tpr7g4743 534 ProSiteProfiles AP2/ERF domain profile. 281 339 IPR001471 GO:0003700|GO:0006355
Tpr7g4743 534 ProSiteProfiles AP2/ERF domain profile. 179 245 IPR001471 GO:0003700|GO:0006355
Tpr7g4743 534 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 7 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4743 Tpr-Chr7 55579780 55583027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4743 4 531 AP2-EREBP Transcription Factor Family AT3G20840 58.754 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Tpr7g4743 AP2 9.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4743 K09285 - gmx:100788471 585.489