Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4737 ATGAATGGTGGCTTTTTGAGTAGTATTTTGGACATTGAATCTTCATTTCAAAGACACCAACAGACTCAGTTAGGTAATTCATCTGGTCAACAAGATATGAATATCATGCCTGGTTTGGAAAATAAGAATCAATTTGATACAATTGAAGTCAAAAATTTGAATATGGGGTTGACTTTTGGTAAAGGTAAGGGAATTGCTAGTTCTAATCCTGATAATAGTAATGACATGAGCGAAGACGATGAGCAGGGTTATGCTGAAGATGGGAATTGCGAGAATTTTTACGATGGTGGTAAAGGTAAAAAGGGGGGATCGTCTCCTTGGCAGCGGATGAAGTGGACGGATAATGTGGTTGGACTTCTTATAGCGGTAGTGAGTTGTGTTGGTGATGATGGTACAATCGGTGGTGTGGATGGGGGTGTTAAAAGGAAATCTGTGGTTTTACAGAAGAAGGGTAAGTGGAAAACTGTTTCCAAGATAATGATAAGTAAAGGTTGTCATGTGTCGCCGCAACAGTGTGAGGATAAATTTAATGACTTGAATAAGAGGTATAAGAGATTGAATGAGATACTTGGTAGGGGAACTTGTTGCCAAGTGGTTGAGAATCCTGCGTTGATGGATTCAATGCTTAACTTGTCTGCTAAGGCTAAGGATGATGTTAGAAAGATATTGAGCTCGAAACATTTGTTTTATAAGGAAATGTGTGCATACCATAATGGACAAAGGATACCAAATAGCCATGATCTTGACTTGCATAGTTATTCGTTGGAACATGGGAAGGACTCGAGAGATAACGATGGCTCTGAGGATGAAGATGAGGATAACCATGAAAGCGAGGAAGATGACTTGGATAATGGAATTAATATTAATAATGCACATGGGGGTGGAGGGAGAATGGAGGAGTTTTGCGATGGAAATAAGTTAAGTGAGGATGATGGCCACTTTTGGCCGCAATCTGTTGGGATGGCAAAACTTGAGGTTGAAATGGCAAGGGTTTTTCAAGACCCTGCAAAGTCGCCGTGGGAGCGAAGAGAGTGGATTAAGGTACAGCTGTTGAAGCTTGAAGAGCAAAATGTGGAGTACCAAGCCAGGGCTTTTGAACTTCAGAAACAGCGGTTTAAGTGGTTAAGATACTGCAGCAAGAAGGATAGGGAGCTGGAGAAGATGAGGATGGAGAACAAGAGAATGAAATTGGAAAATGAGCGCAGAATCTTGAAACTGAAGCAGAGAGAGCAGGAGGCAGACTTCAGTAGGTCTGAGATGTCCTTAGACCCTACTTCCATTGGTATCAACCGGCCACGAGGGAGGGAACATATCAACTTGGCTAGGCAGCAGTAG 1335 0.4195 MNGGFLSSILDIESSFQRHQQTQLGNSSGQQDMNIMPGLENKNQFDTIEVKNLNMGLTFGKGKGIASSNPDNSNDMSEDDEQGYAEDGNCENFYDGGKGKKGGSSPWQRMKWTDNVVGLLIAVVSCVGDDGTIGGVDGGVKRKSVVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTCCQVVENPALMDSMLNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNSHDLDLHSYSLEHGKDSRDNDGSEDEDEDNHESEEDDLDNGININNAHGGGGRMEEFCDGNKLSEDDGHFWPQSVGMAKLEVEMARVFQDPAKSPWERREWIKVQLLKLEEQNVEYQARAFELQKQRFKWLRYCSKKDRELEKMRMENKRMKLENERRILKLKQREQEADFSRSEMSLDPTSIGINRPRGREHINLARQQ* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4737 444 MobiDBLite consensus disorder prediction 265 280 - -
Tpr7g4737 444 Pfam Myb/SANT-like DNA-binding domain 109 235 IPR044822 -
Tpr7g4737 444 PANTHER F16F4.11 PROTEIN-RELATED 6 418 - -
Tpr7g4737 444 MobiDBLite consensus disorder prediction 409 444 - -
Tpr7g4737 444 Gene3D - 112 185 - -
Tpr7g4737 444 Coils Coil 378 414 - -
Tpr7g4737 444 MobiDBLite consensus disorder prediction 258 286 - -
Tpr7g4737 444 Coils Coil 350 370 - -
Tpr7g4737 444 MobiDBLite consensus disorder prediction 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4737 Tpr-Chr7 55532257 55535479 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr7g4737 Myb_DNA-bind_4 3.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4737 - - ccaj:109806698 636.721