Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4733 ATGGCTGCAGCAGCAACTTCATACAAGGGACGATCATGGCAGAATACCGAAGAGGATGAGTTCGATTGGGATACTTTTAAAAGGAGACATCCCGTTAAGTTACCTTGTCAGTTACCACATGGTGCTTCTATACATGCACGCCCTGTTATGCGACTCCCTTCGCCCGACCAAAGTTTACATTTTCCTCCGGCCGCACGCCCTGTTATGCGACTCCCTTCGCCCGACCAAAGTTTACATTTTCCTCTGGCCGCACGCCCTGTTATGCGACTCCCTTTGCCCGGCCAAAGTTTACATTTTCCTCCGGCTGGCGGCCCACATGCTCCGCCCCAGATGCTACCTCGTCCGAATCCTCCTTTTGTGTCAAGCCAACATCCATCTGTTGGATATTCTAGTTTGATTAATTCACTCATGGCCCAAGGTGTAATATCATTGGCTAATCAAACTCCTACACAGGATTTTGTTGGCATTGAGTTTGATCCCAATATTCTAAAGGTTCGTCACGAATCTGTAGTCAGTGCCTTATATGGTAAGTTGCCTAGACAGTGCAAAACTTGTGGCCTACGATTCAAATCACAAGATGAGCACAGAAGACACATGGATTGGCATGTGACTAAGAACCGTAACCGTATTAGTATGTCTAAAAACCATAAGCTGAAACCCTCTCGCAAGTGGTTTGTCAGTGAGACGATGTGGCTCAGCGGCACAGAGGCATTGGGAACTGAATCAGCTCCAGCTCCAGGTTTTTTGCCAACTGAGGAAAAGAAAGAAGACAAAGAATTGGCAGTTCCTGCTGAAGAGGACCAGAAAACATGCTCTCTATGTGGAGAGCATTTCGATCAGTTTTACAGTGATGAGACAGATGATTGGATGTACAGAGGAGCTGTTTACCTTAATGCGCCCAATGGAATAATAACAGCCGGCATGGACAGGTCACAGTTAGGCCCCATTATTCATGCTAAATGCAGATCTGAATCTACTACCAACCCATCTCAAGATTGTGTGATGGATGGAGAAGGCAATCAAAGAAAACGTATGCAGCAAGGCACATATGATGAATGCAATCAAAGAAAACGAATGCGATCCTTTTTTTAG 1092 0.4588 MAAAATSYKGRSWQNTEEDEFDWDTFKRRHPVKLPCQLPHGASIHARPVMRLPSPDQSLHFPPAARPVMRLPSPDQSLHFPLAARPVMRLPLPGQSLHFPPAGGPHAPPQMLPRPNPPFVSSQHPSVGYSSLINSLMAQGVISLANQTPTQDFVGIEFDPNILKVRHESVVSALYGKLPRQCKTCGLRFKSQDEHRRHMDWHVTKNRNRISMSKNHKLKPSRKWFVSETMWLSGTEALGTESAPAPGFLPTEEKKEDKELAVPAEEDQKTCSLCGEHFDQFYSDETDDWMYRGAVYLNAPNGIITAGMDRSQLGPIIHAKCRSESTTNPSQDCVMDGEGNQRKRMQQGTYDECNQRKRMRSFF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4733 363 ProSitePatterns Zinc finger C2H2 type domain signature. 182 202 IPR013087 -
Tpr7g4733 363 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 9 327 - -
Tpr7g4733 363 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 9 327 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4733 Tpr-Chr7 55505351 55506568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4733 120 346 C2H2 Transcription Factor Family AT4G04885 62.174 2.43e-91 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g4733 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4733 K14400 - gmx:100794796 355.91