Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4726 ATGAGAAAGCCAGAGGTTTCTAGTACTAAAAATAACAACAATAATAAGAAGAAGCTTAGAAAAGGATTATGGTCACCAGAAGAAGATGAGAAACTTATGAACTATATGGTAAGGAATGGACAAGGTTGTTGGAGTGATGTGGCAAGAAATGCTGGATTAGAAAGATGTGGCAAAAGTTGTAGGCTAAGATGGATCAATTATTTAAGGCCTGATCTTAAAAGAGGTGCTTTCTCACAACAAGAAGAAGAACTCATCATTCATTTTCATACCCTTCTTGGAAACAGATGGTCTCAAATAGCAGCACGTTTGCCAGGAAGAACAGACAACGAAATAAAAAACTTTTGGAATTCAACCATAAAGAAAAAACTTAAGAACTTGTCTTCAACCTCACCAAATGCAAGTGATGAGTCCTCACCTGAGCCTAACAAAGATCTCAATATACAAGGATCCTATATTTCTACACACCAACATGCAAATTATAACAATTACATGAACATGCCTATGTTCACCTCATCATCACCATCAATGTTGCAAAACACAATTTTCAATACCATGAACATTGATACATTGCCTATGCTAGATCATGGTGGATCATACTTCAACAATGGAGTTGAAATTATTAAAGATTCTTATTTAGAAAATGGTGTGTTTGGAAGTGTAAATATTGGAGTACAAGAGGAAGTGTGCAAGAAAGAAACTAACAATAGTGATTATTATTTTGGTGACATAAACATCAACACTATACTTAACAACTGCAATATTATTGAGAGTAATAATAATAAAATTGAAAATAGGAGTGAGGTAGTGGAGAATTTATATCAAGAACAATTCAATTTGGGAGAGTTGGAGTTTGAGGAGTTGATGAAAGATGTTTCATCTTTTCTCTTTTCTTGA 894 0.3378 MRKPEVSSTKNNNNNKKKLRKGLWSPEEDEKLMNYMVRNGQGCWSDVARNAGLERCGKSCRLRWINYLRPDLKRGAFSQQEEELIIHFHTLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKKLKNLSSTSPNASDESSPEPNKDLNIQGSYISTHQHANYNNYMNMPMFTSSSPSMLQNTIFNTMNIDTLPMLDHGGSYFNNGVEIIKDSYLENGVFGSVNIGVQEEVCKKETNNSDYYFGDININTILNNCNIIESNNNKIENRSEVVENLYQEQFNLGELEFEELMKDVSSFLFS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4726 297 SMART sant 20 70 IPR001005 -
Tpr7g4726 297 SMART sant 73 121 IPR001005 -
Tpr7g4726 297 CDD SANT 76 116 IPR001005 -
Tpr7g4726 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Tpr7g4726 297 Gene3D - 18 74 - -
Tpr7g4726 297 MobiDBLite consensus disorder prediction 1 23 - -
Tpr7g4726 297 Pfam Myb-like DNA-binding domain 74 117 IPR001005 -
Tpr7g4726 297 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Tpr7g4726 297 CDD SANT 24 68 IPR001005 -
Tpr7g4726 297 Gene3D - 75 146 - -
Tpr7g4726 297 PANTHER MYB TRANSCRIPTION FACTOR 1 296 - -
Tpr7g4726 297 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Tpr7g4726 297 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Tpr7g4726 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Tpr7g4726 297 PANTHER MYB DOMAIN PROTEIN 55 1 296 - -
Tpr7g4726 297 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4726 Tpr-Chr7 55457532 55461466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4726 1 296 MYB Transcription Factor Family AT5G12870 46.624 2.94e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g4726 Myb_DNA-binding 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4726 K09422 - gmx:100785810 340.502