Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4711 ATGGATCGAAAATCAGAACATATTTATGAGTCTGATTTTGACTACTATCAAGATAGATATTACAGTGACTTGAAAGATGGTTACTGTAGGTTGAAAATCTCAGGTTCAACATATAGGTGTCCATTCTGTGACAACAAGGATTATTACTCTTTGAGTGAGCTTCAGAGACATGCTTCCAGAATTATGGATGACTCGCGCGAGACGGTTAAGGAAAGTGCCAAACATTCTGCACTTAAAATGTACATTGGTAAAGAAGAGCCACCTGCTGTTAAAACCAGTAGAGAAAAGTTACCTGCTTTGAGTATTGCTGAGAACCAGTCACCGAATGAGATTGTTGCTGGTGATGAATTGTTTGTCTGGCCATGGATGGTAATTCTGGCAAACAATGTTACCACATTTGACCCGAAGAGCGGAAAATATGTTGGAAAGAATCGTGAGAAAATTAAGGAGGAGCTGATCATGAAAGGGTTTCAGCCGCTGAAAGTTACTGTGTTGTGGAACTTTTATGGACAAACACCCTTTGCTATTGTTGAATTTGGCAAAGAGTGGGATGCTTTCCACAATGCTGTGATGTTAGAAAGGAGCTTTCAAGCAGAGCATTGTGGTAAGAAGGATTATTTGAATTTAGACAAGCAGGATCGAGGAGATAGACTCTATGGGTGGATGGCACGTCATGACGACTATAATAATTATCGGGATACATTTGGCAAACACCTCCGGGCAAATGGGGATTTGAAAACTGTTTCTGGAAAAGAAGCTGAGGATAATAGGAAAGCAAAAAAGCTTGTCATTGGTTTGGCCAACACTTTGCTGATGAAAAACAAGGAATATGAACAGACAGCAAGCAAATTTCATGAAGCTAGTGAGACCCTAACAAAAGTAATGGTTGAAAAAGAGGAGATGCTTGAACTTTTTAATAAGGAAATAAGCAAGATGCGGCAGGATGAACGTGATTATCTGGAGAATGTGTCTAAGGATCATGAAAAAGCTAGGTTGGAACTGGAAGCTCGGAGGAATGTACTTATGTCCCGTGAAAAGGATCTGCAGAAGCGTCAAGCAGACAATCATAATGAGAGAGAAAAGCTATATCTTGAAAAGAAAAGAAATGAGATGGCAATAGCAGAGCAAAAAAAGGCTGATGAACAAATGATGCATTTGGCTGAAGAACACAAGAAAGCAAAAGAGAAACTTCACAAGAAAATTCATGAGCTGGAGAGGGGACTTGATGCAAAACATGGATTGGAATTGGAAATTGAACAGCTGAGAGGAGCTCTCCAAGTAATGAATCACATTGGAGATACTGATCTGGAAGAGAAGAAAAAACTGGAGGCAATCAAAATGGATCTGAAAGAAAAGGAAGAGGAATTGAAAGACGTGGAAGATCTTCAACAAACACTGGTTGTTCAGGAGCGCAAAACTAATGACGAATTGCAAGATGCCCGCAAAACTTTAACAAGTTGGATTGGCTGCCCAAATGCTCGAGCCATAATTTCAGTGAAAATGATGGGCAAACTTGATATTAAGCCATTTGAGGAAGCAGCTGAGAGAAAGTTATCTGACGATGTGAATATGAAAGCAGCAACTAAGACAAAACTTTCCTCTGAAGTGAAATTGAAAGCAATTGAGTGGTGCTCACAGTGGGAGGAATATCTTAAGGATCCAAGTTGGCATCCGTTCAAAATTGTAATTGACAAAGAAGGGAACTCCAAGGAAATTTTAGATGAAGAAGATGAAAAACTGAAAAGTTTGAAAGAAGAGCTTGGGGATGAGGTCCATGATGCAGTAGCTACAGCTCTGAAGGAGATGAATGAGTACAATCCTAGTGGTAGGTACACAGTACCAGAACTCTGGAATTTTAGGGAAGGAAGGAAGGCTTCGTTGAAGGAGGGTGTTTGTCATTTAATGAAGCAATGGAAGCTATTGAAACCAACTACTAAACGAAAGAGAACTTGA 1953 0.3984 MDRKSEHIYESDFDYYQDRYYSDLKDGYCRLKISGSTYRCPFCDNKDYYSLSELQRHASRIMDDSRETVKESAKHSALKMYIGKEEPPAVKTSREKLPALSIAENQSPNEIVAGDELFVWPWMVILANNVTTFDPKSGKYVGKNREKIKEELIMKGFQPLKVTVLWNFYGQTPFAIVEFGKEWDAFHNAVMLERSFQAEHCGKKDYLNLDKQDRGDRLYGWMARHDDYNNYRDTFGKHLRANGDLKTVSGKEAEDNRKAKKLVIGLANTLLMKNKEYEQTASKFHEASETLTKVMVEKEEMLELFNKEISKMRQDERDYLENVSKDHEKARLELEARRNVLMSREKDLQKRQADNHNEREKLYLEKKRNEMAIAEQKKADEQMMHLAEEHKKAKEKLHKKIHELERGLDAKHGLELEIEQLRGALQVMNHIGDTDLEEKKKLEAIKMDLKEKEEELKDVEDLQQTLVVQERKTNDELQDARKTLTSWIGCPNARAIISVKMMGKLDIKPFEEAAERKLSDDVNMKAATKTKLSSEVKLKAIEWCSQWEEYLKDPSWHPFKIVIDKEGNSKEILDEEDEKLKSLKEELGDEVHDAVATALKEMNEYNPSGRYTVPELWNFREGRKASLKEGVCHLMKQWKLLKPTTKRKRT* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4711 650 Coils Coil 357 407 - -
Tpr7g4711 650 CDD RRM_like_XS 118 228 IPR005380 GO:0031047
Tpr7g4711 650 Gene3D XS domain 112 285 IPR038588 -
Tpr7g4711 650 Pfam XH domain 500 642 IPR005379 -
Tpr7g4711 650 PANTHER RIBONUCLEASE P SUBUNIT P38 4 648 IPR045177 GO:0080188
Tpr7g4711 650 Coils Coil 295 315 - -
Tpr7g4711 650 Coils Coil 573 593 - -
Tpr7g4711 650 Coils Coil 439 472 - -
Tpr7g4711 650 Pfam XS domain 115 229 IPR005380 GO:0031047
Tpr7g4711 650 PANTHER FACTOR OF DNA METHYLATION 4 4 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4711 Tpr-Chr7 55354726 55359411 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g4711 XH 1.1e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4711 - - mtr:MTR_4g046643 862.062