Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4701 ATGAGGATTATTCAGGAGAATAATAATAATGTATCTGAAAATATTCTGAGGCAAGTTGTTGCTGAAATGGAGGAATTGTTTATGACTGATGTTGAAGAGGGTAATCAACAACGGCCAGAGCTAGCTCTAGTAGGTTCAAGTTGTCTGTTTTGTATGGTATGGAGAGGGAGGCTATATATCGCTAACGTTGGAGGCTCTCGTGCTGTAATGGGCTCTTTGGATCCATTTGATAGACTCAATGTTAGGCAGTTGGTCGAAGATCACAATGCTCGTAACAGGCATATTAAAAAAGAACTCAAGAAGTTGCATCCAAATAATCCGACTATTGTGACATATAATTTTGATGCATGGCGTGTTGGAGGCATAAGTGAAGTAAGCAGATGTATAGGAAATGCATATTTAAAGCGGGCACCGTTCACTTTAACCTCATCCTTCCGAGTCCCACAGTTGGAACTTGCACCTTCTGATTTTACCCGACCTTTGCTATCAGCAGAACCTGCAATATCTTCAAGAGTCTTAAATGACGTCGATAAATTCATTATATTTGGATCTGGTGGACTTTGGAAATTGTTGTCAAATTGGCAAGCAGCTGAAATTGTTCACACCAATCAACGAGATGGAATCGCGAAAAGGATTTTGATGACTGCTCTACAGATTGCAGCTAGAAGAAATAATATGAGCTATAGTGAGCTTTCGAAGATTCATACGAGACATGGTGTTGTTATTAGGGGTCCTAGTGTTTCTGTTAAAGGGACTAGGCGGGCGTATCATGATGATATCTCTGTGATTGTTGTATTCTTCGACAAAAATCCGGAACTGAATCCGACTGTGATGCCAGTGGTGACCTCGGTGCCAGGAATCGATTCCTTCAGAGGCTTCGATGACGCGATTCATCCATCACCTTTTAGATATCTTGATGATGTCTCTGAAGCACATCAATACCTTGAGACGATTGTCTGA 960 0.4115 MRIIQENNNNVSENILRQVVAEMEELFMTDVEEGNQQRPELALVGSSCLFCMVWRGRLYIANVGGSRAVMGSLDPFDRLNVRQLVEDHNARNRHIKKELKKLHPNNPTIVTYNFDAWRVGGISEVSRCIGNAYLKRAPFTLTSSFRVPQLELAPSDFTRPLLSAEPAISSRVLNDVDKFIIFGSGGLWKLLSNWQAAEIVHTNQRDGIAKRILMTALQIAARRNNMSYSELSKIHTRHGVVIRGPSVSVKGTRRAYHDDISVIVVFFDKNPELNPTVMPVVTSVPGIDSFRGFDDAIHPSPFRYLDDVSEAHQYLETIV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4701 319 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 4 292 - -
Tpr7g4701 319 CDD PP2Cc 13 267 IPR001932 -
Tpr7g4701 319 Pfam Protein phosphatase 2C 14 221 IPR001932 -
Tpr7g4701 319 Gene3D - 2 272 IPR036457 -
Tpr7g4701 319 SUPERFAMILY PP2C-like 9 269 IPR036457 -
Tpr7g4701 319 ProSiteProfiles PPM-type phosphatase domain profile. 1 267 IPR001932 -
Tpr7g4701 319 PANTHER ALPHABET, ISOFORM E-RELATED 4 292 - -
Tpr7g4701 319 SMART PP2C_4 8 265 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4701 Tpr-Chr7 55266468 55268181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4701 1 302 PP2C-type Phosphatase Gene Family AT5G06750 41.176 1.55e-71 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4701 K01102 - pvy:116121639 244.202