Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4699 ATGGTGGCGCAGAACAGAATAAATTATGGATTTAATGGCTATCAGGTGCCAAAAAAGCCTCGTGCCGCACGATCACCTAGGAAGAGGGATACATTACAAAGAAGTGTGGAAAACGATCGAATGTGTGCGATTGACTTATTGGCCACCGTAGCTGCCGGCACTTTATTGCAAGAGAAACAGAATCCAATCATACCTAGTGATGGATCACCGAAAAAAGATCAGCATGGATTTGTTAAAGAAGAAGATGAAGATGCAAATACACCATTCAAAGCCGAGCTTCCTAATGAAGCAAGTTGTGACAAAAGGCTTCAACATGGATTTGTTAAGGAAGCATGTGCGGATGCAAATAAGCCATTGAAAGCCGAGCTCTCTGATGATGGAAGTAGTGAGAAAAAATGTTTCTCTACTCTTTCTTCACAGGTGTACGATCCAAATTTCTGTTCGAAGGAAAATCTGCATCATCCTGAAATCGATGGTCAATCATGCATTGCTTCTATAGTAACAAGTTCTAGTTGCTCGGAGAGGTTTGTTACTGACAATATGGTCGATAGAAAAAGCCATAGTGAAATGAAAAATATTACTAGCAAAGTTGAATTAGGATCTTCTGGATATCCAGATTGTAATGATTGCAACTTAGATGTTCATGTAAGTATAGTAAAGGACGAGGTCCAAAATTCCGAGAAGGTGCCAATCGGTACTTCGGTTGGAATGTGCTGTTTTGAGGATCCCGTGGATGAAAAACCTCAAGTGCCAGTCAATTTAGGTGGCAATGCCAAGTTGTCTGGTTATGAAGATAGCACGCCTCATAACTCTTTGTTCAAAGGTTGCGACAATGTAACAGTAGTTGGTAGAGATGATGACGAAAACTTTTCAGGGTGCTCTCACCCTAGTTCAAAAACAAAGACCTTTAGGTCAAAGACTTGTATAGGTGACCAAAGAATAAGGAAAAGATTGGCTTCTAAATATCGGAAAGTTGCTCGAGAATCAAAGCACGATACACTTTCTAACAATGTAGTGGATAGAAATTTCAACACAGTTTACAGCAATAGGAAGAACAGTTATAAACGCCAACTATCTCAAATGAATATTCCTTTCAAGAAGAGGAAGATTTTTGACTGCAGCTCCACTTCAAATTCTAATGGATATATAAGAAATGACAACACTTATTATTCAACCAAGAATGATATGAATCAAGGCGTTTCTTGTTCATCTGCTCGGATACGCAAAGATCCTGGAATGTCATCCTTGGAAGGATATCATCGTTCAGCATTACGATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTGCCAGAGCTTTTTATTGAGATTCCAGAAACTGCAACCGTCGCGTCCTTGAAGATAGCAGTGATGGAAGCGGTGACTACTCTACTTCGAGGTGGATTGCGTGTTGGCATGATTCTCAATGGAAAGAAACTTAGAGATGACAGTAAAACTTTACTTCAGACAGGAATTTCTCATGATAATGCGCTGGATGCTTTGGGCTTCACCTTGGAGCCTAATTCTTCTCAAAGCCTACCACTCACATGCGCTAAAGATTCTCTTCATGTTCCGAGTGCGGACATGCCTCTATCTTTAATAGGGCAACCTTCCAGTCCAGCTGTAGTTCGTCCGATTCAGAGGATTCAAGGTTTCTGCGACACCGAGCATCAAGTAACCAGTTTAAGTAACATTGTTGAAAGTGAACACGATTCAGCACCTTCTCCTATAAGCACAATAGGTGAAAAAAGATTGACAGATTCCAAAGAACTTGTTACTATTCCTGAAATGGATACGGAGGGACTAGCTGTGCTACCAGTAGAGCAGAAGCCAAAGCGAACTGAGATGTCACAACGTCGCCGAATTCGTAGGCCTTTTTCTGTTGCCGAAGTGGAAGCACTTGTTGAAGCAGTTGAGAGACTCGGAACTGGAAGGTGGCGTGATGTGAAACTTCGTGCTTTCGATGATGCAAAGCATAGGACATATGTGGATTTGAAGTGCAGGATAAATGGAAAACATTGGTACACACGGCAAGAATATCTCCTCAACAAAGAAGAGGAGAGCCTGTACCCCAAGAACTTTTGGATAGGGTCCTTACTGCTCATGCATATTGGTCCCAACAGCAACAAACTAAGCAACATCAACTCAAGCATCACCCTGAAACTTGCCTTCTACTTTAATATAGGGGGGGTGTTAATAGCAATGGACCATATATGA 2226 0.4128 MVAQNRINYGFNGYQVPKKPRAARSPRKRDTLQRSVENDRMCAIDLLATVAAGTLLQEKQNPIIPSDGSPKKDQHGFVKEEDEDANTPFKAELPNEASCDKRLQHGFVKEACADANKPLKAELSDDGSSEKKCFSTLSSQVYDPNFCSKENLHHPEIDGQSCIASIVTSSSCSERFVTDNMVDRKSHSEMKNITSKVELGSSGYPDCNDCNLDVHVSIVKDEVQNSEKVPIGTSVGMCCFEDPVDEKPQVPVNLGGNAKLSGYEDSTPHNSLFKGCDNVTVVGRDDDENFSGCSHPSSKTKTFRSKTCIGDQRIRKRLASKYRKVARESKHDTLSNNVVDRNFNTVYSNRKNSYKRQLSQMNIPFKKRKIFDCSSTSNSNGYIRNDNTYYSTKNDMNQGVSCSSARIRKDPGMSSLEGYHRSALRSRDSHVKLRIKSFRVPELFIEIPETATVASLKIAVMEAVTTLLRGGLRVGMILNGKKLRDDSKTLLQTGISHDNALDALGFTLEPNSSQSLPLTCAKDSLHVPSADMPLSLIGQPSSPAVVRPIQRIQGFCDTEHQVTSLSNIVESEHDSAPSPISTIGEKRLTDSKELVTIPEMDTEGLAVLPVEQKPKRTEMSQRRRIRRPFSVAEVEALVEAVERLGTGRWRDVKLRAFDDAKHRTYVDLKCRINGKHWYTRQEYLLNKEEESLYPKNFWIGSLLLMHIGPNSNKLSNINSSITLKLAFYFNIGGVLIAMDHI* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4699 741 SUPERFAMILY Homeodomain-like 623 681 IPR009057 -
Tpr7g4699 741 MobiDBLite consensus disorder prediction 61 86 - -
Tpr7g4699 741 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 669 IPR031105 -
Tpr7g4699 741 ProSiteProfiles Ubiquitin domain profile. 431 501 IPR000626 GO:0005515
Tpr7g4699 741 Gene3D - 615 679 - -
Tpr7g4699 741 SUPERFAMILY Ubiquitin-like 426 515 IPR029071 -
Tpr7g4699 741 CDD SANT_TRF 627 669 - -
Tpr7g4699 741 MobiDBLite consensus disorder prediction 16 35 - -
Tpr7g4699 741 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 669 - -
Tpr7g4699 741 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4699 Tpr-Chr7 55254015 55259470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4699 - - gsj:114374220 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4699 7 55254015 55259470 Tpr7g4699 7 55254015 55259470 ECH
Tpr7g4699 7 55254015 55259470 Tpr4g3191 4 37781214 37786336 ECH
Tpr6g3843 6 43615543 43623863 Tpr7g4699 7 55254015 55259470 ECH