Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4690 ATGGATCGAAAATCAGAACATGTTCATGAGTCTGATTTTGACTACTATGAGTATAGATATTACAGTGACTTGAAAGATGGTTACTATAGGTTGAAAATCTCAGGTTCAACATATAGGTGTCCATTCTGCCACAACAAGGATTATGACTCTTTGAGTGACCTTCAGAGACATGCTTCTAGAATTATGGATGACTCGCGTGAGACGGTGAAGGAAAGTGCGAAACATTCTGCCCTAGAAAGGTACATTGGTAAAGAGAAGTTTGCTGCTGTTAAAACTGGTCATGATAAGTCAACTGCTGTTAAAACTGGTCGAGATAAGTCCGCTGCTGTTAAAACTGGTCAAGGTAAGTCAGCTGCTGTTAAAACTGGTCGAGATAACTCAGCTGCTGTTAAAACTGGTCGAGATAAGTTCGCTGCTGTTAAAACTGCTCAAGATAAGTCAGCTGGTTCGAGTATTGCTGTTGATAAGGATAGGTCACATAATGCTAATGTTGTTAGGAATCAGTCATCTAATGTGAATGTTGCTGGTGATGAATTGTTTGTCTGGCCATGGATGGTAATTCTGGCAAACAATGTTACCACATTTGACCCGAAGAGCGGAAAGCATGTTGGAAAGAATCACAATAAAATTAAGGAGGAGCTGCTCTTGAAAGGGTTTGAGCCCCTGAAAGTTACTACGCTTTGGAATGCTAGAGGACAGACACCCTTTGCAATTGTTGAGTTTGGGAAAGAGTGGGTTGGTTTCCACAATGCCATGAAGTTAGAAAGGAGCTTTCAAGCAGAGCATTGTGGTAAGAAGGATTACATGGATTTATGGCAGCGGGGTCATGGAGATAGACTCTATGGTTGGATGGCACGTGCTGACGACTATCATAATGTTAGGGATATAGTTGGCAAACACCTCCGGGATAATGGGGATTTGAAAACTGTATCTGGAAAAGAAGCTGAGGATGATAGGAAAGCAAAGAAGCTTGTCTCTGGTTTGGCAAATACTTTAATGCTGAAGAACAAGGAATATGAACAGGCAGCAAGCAAATATCACGAGGCTAGTGAGTACCTGACGAAAGTAATGGTTGAAAAAGAGGAGATGGTTGAACATTTTAATAACGAAATAAGCAAGATAAGGCAGGTTGAACGCGATTATCTGGAGAGTTTATCCAAGGATCATGAAAAAGCCAGGCTGGAACTGGAAGCTCGGAGGAATGAACTTATGTCCCGTGAAAAGGATCTGCAGAAGCGTCAAGCAGACAATCATAATGAGAGAGAAAAGCTATATCTTGAAAAGAAAAGAAATGAAAAGGCAATAGAAGAGCAAAAAAAGGCTGATGAACAAATGATGCATTTGGCTGAAGAACACAAGAAAGCAAAAGAGAAACTTCACAAGAAAATTCATGAACTGGAGAGGGGACTTGATGCAAAACAAGCATTAGAATTGGAAATTGAACAGCTTAGAGGAGCTATCCAAGTAATGAATCACATCGGAGAGACTGATCTGGAAGAGAAGAAAAAACTGGAGGCAATAAAAATGGATCTGCAAGAAAAGGAAGAGGAATTGGAAGGCGTAGAAGATCTTCAACAAACACTGGTTGTTCAGGAGCGCAAAACTAATGACGAGTTGCAAGATGCCCGCAAAAAATTAATAAGTTGGATTGGCTACCCAAAGACTCGAGCCATAATTTCAGTGAAAAGGTTGGGCGAACTTGATGGTAAGCCATTTTTGGAAGCAGCTAAGAGAAAGGTTTATGCTGAAGTGAATGCAAACGGAGCAACTAAGAGAGAACTTTTCGATGAAGCAAAAGTCAAAGCACTCCTGTGGTGCACACAGTGGGATGAATATCTTAGGGATCCTAACTGGCATCCTTTCAAAATTGTAATCGACAAAGAAGGGAAACCCAAGGAAATTTTAGACGAAGAAGATGAAAAGCTGAGAAGTTTGAAGGATGAGTTTGGAGATGAGGTGCACGATGCAGTAGCTACAGCTCTAAAGGAGTTAAATGAGTACAATCCTAGTGGTAGGTATGCAATACCGGAACTTTGGAATTATAAAGAAGGAAGGAGGGCTTTATTGAAGGAGGGTGTTTCCCATTTACTAAAGCAATGGAAGCTATTGAAACCCAATACTAAGCGAAAGAGAACCTGA 2139 0.4081 MDRKSEHVHESDFDYYEYRYYSDLKDGYYRLKISGSTYRCPFCHNKDYDSLSDLQRHASRIMDDSRETVKESAKHSALERYIGKEKFAAVKTGHDKSTAVKTGRDKSAAVKTGQGKSAAVKTGRDNSAAVKTGRDKFAAVKTAQDKSAGSSIAVDKDRSHNANVVRNQSSNVNVAGDELFVWPWMVILANNVTTFDPKSGKHVGKNHNKIKEELLLKGFEPLKVTTLWNARGQTPFAIVEFGKEWVGFHNAMKLERSFQAEHCGKKDYMDLWQRGHGDRLYGWMARADDYHNVRDIVGKHLRDNGDLKTVSGKEAEDDRKAKKLVSGLANTLMLKNKEYEQAASKYHEASEYLTKVMVEKEEMVEHFNNEISKIRQVERDYLESLSKDHEKARLELEARRNELMSREKDLQKRQADNHNEREKLYLEKKRNEKAIEEQKKADEQMMHLAEEHKKAKEKLHKKIHELERGLDAKQALELEIEQLRGAIQVMNHIGETDLEEKKKLEAIKMDLQEKEEELEGVEDLQQTLVVQERKTNDELQDARKKLISWIGYPKTRAIISVKRLGELDGKPFLEAAKRKVYAEVNANGATKRELFDEAKVKALLWCTQWDEYLRDPNWHPFKIVIDKEGKPKEILDEEDEKLRSLKDEFGDEVHDAVATALKELNEYNPSGRYAIPELWNYKEGRRALLKEGVSHLLKQWKLLKPNTKRKRT* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4690 712 Pfam XS domain 177 291 IPR005380 GO:0031047
Tpr7g4690 712 Pfam XH domain 562 704 IPR005379 -
Tpr7g4690 712 CDD RRM_like_XS 180 290 IPR005380 GO:0031047
Tpr7g4690 712 Gene3D XS domain 173 347 IPR038588 -
Tpr7g4690 712 PANTHER RIBONUCLEASE P SUBUNIT P38 4 710 IPR045177 GO:0080188
Tpr7g4690 712 Coils Coil 382 493 - -
Tpr7g4690 712 Coils Coil 501 531 - -
Tpr7g4690 712 PANTHER FACTOR OF DNA METHYLATION 4 4 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4690 Tpr-Chr7 55187136 55192361 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g4690 XH 7.7e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4690 - - mtr:MTR_4g046643 848.58