Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4683 ATGGGAAAACACTTGATTAATTCAGAGGAATCCACTCAAATTCAAGAAGTTAATCAAGGATGCATGTGGGGAATGTTTAATATTCTTGATTACCATCATTGGGGTGTCAAAAAGGTGTTTCATCATAAAAAGAAAAGACATAACAGATATAAGAGAAAGATCACTCTGCAAGAGCAACAAAATGTAGTTACAGAAGCAGAATCACACTTGGTCAGTCAACATAGAGAAATATCAAGTGCTAAAGGTCAAACTAGTAGTGAGAATGCACTTCATCAGAAGAAAGATGGAAATACAACAGAAAGTTCCCTTAATAGAGACATTTCAATTAAATTTAAGAATAATGATGATGTTTTGGAGCTAATTAGTGTGGAGAAGAATTTGTTACTCAAATTTCTAAAAGATATAGACTTTGGTGGTAAAAAATATCATAAAGCTTCCCACAACAAAGCAACATTGACAAAATCAGGATCGTTTCCTTTACCTGCGTCTTCTAAGACGAAAAATATTAGCTCTAGTACCTTCCGAGCCAAGCAAACTGAAATTTGGGATTTTCCTAAGGGAGAAAAGTTGCGTGTCGGCACTCATGTACCGAAAAAGTTTGGATCAAGTTCAGTGAAAGATATTTCGTATGAAACGTTGAAGTCTTCTGCGACTGATAATGGAATTGATAGTGTCGTTGCCGTGGAACAAAAGTCAAGCATTTCTACGCGGTCTTCTGACGGATTAAACCACAAAGGATGGAATCAAGTGGTTACTCATCAGTTCAAAGTTATAAAACAGAAGATTAAACATGCAATTGTGGAATTAAAGAAAAGTGGTCACAGTAAAACTTCACCTGAATACAGCAACATTGATAATGAGAAAGAAATCTCGCAAAGCTTAGACGATGGTGCAATTCATGAATACAAAAAGAGTAGAAGCTTGGGTGAGACTAAAGCTTCTGAATCTGGTTCCAACAAACACGAACCTCGCCTGATGCGAAGAACGTCTTCTCTTAATGAATCGATGGATAGATATACTCAATTGTTTGAGAAAAGTTTAAGCAAAGAGGTCAAGTGGCAAAGCTCAAAGTCGAAGAGTTTAAGATTGACAAATGACGATAAGACTCAAAAGAGTAAGCATGCTCGTATTTTCTCCAGAAGCAATTTGTCTATGCCTAATCTCGAGGCATTAGGATTCATTCTACATGAAGCTCTTCTTGAAACAAATGATATCGGAAATAATATAGTGGAAAGTGATAATGATGTTCAAAGTAAATCAGTGAGCCTTTCTTTAAAGAATGATAAATCAACCGATCATTTTAAAGAGGCTGAAATTGACGAAACAGTTGAAGGAAGTGGACGAGATGTGAATCCTAGTTCTCGTTCTTTATCGGATAAGATGGTGGAGGAAATTGATGAAGGAGTTACCTGTGATCAAAGGGAGAACATACACGATCCAGCATCGGAACAAGAAGGAAAAGAATCGAATGCACGAGGCTCAAATGCTAGTGTAACAGCCGCCGAAGACACAAACAAGAGTCTTGAAACTGATATCTTGCACTTCAAGTCATATTCAGAAACCGATTCCAATTTCAAATATGTGAAAGATATTCTTGAATATTCGGGTTTCACGAGAAATGAGCAGGCTCAAATGCGATACACGGTAGACCAGCCAATAAAACCATCGTTATTCACAGCTTTGGAAGAATCTTTGCTTCATGAAAATGAGTATTCCGGTGACGAGATTACCAACATATGTGATCGCCAACTTCTATTTAACTTGATTAACGAGGTACTCTTTCAAATGTACGAAAAGTCACCAACTTACTTTCCGAAACCCTTCGCCTTCAACTACAAACTCAAATCAATGCCTAAAGGGAACTATCTTGTTAATGAAGTATGGAACAATGTTAGTTCATATTTGAGTTTGAGACCAGAGTTAGATGAGACATTAGATGATGTTGTAGGTCGTGATTTGACAAAGGGAACTGGTTGGATGAATCTTCAACAGGAAGAGGAATGTGTAGCACTTGAACTGGAGGATATGATCATAGATGATTTATTAGATGAAATTATCTTCTCTTTTGTTTGA 2073 0.3681 MGKHLINSEESTQIQEVNQGCMWGMFNILDYHHWGVKKVFHHKKKRHNRYKRKITLQEQQNVVTEAESHLVSQHREISSAKGQTSSENALHQKKDGNTTESSLNRDISIKFKNNDDVLELISVEKNLLLKFLKDIDFGGKKYHKASHNKATLTKSGSFPLPASSKTKNISSSTFRAKQTEIWDFPKGEKLRVGTHVPKKFGSSSVKDISYETLKSSATDNGIDSVVAVEQKSSISTRSSDGLNHKGWNQVVTHQFKVIKQKIKHAIVELKKSGHSKTSPEYSNIDNEKEISQSLDDGAIHEYKKSRSLGETKASESGSNKHEPRLMRRTSSLNESMDRYTQLFEKSLSKEVKWQSSKSKSLRLTNDDKTQKSKHARIFSRSNLSMPNLEALGFILHEALLETNDIGNNIVESDNDVQSKSVSLSLKNDKSTDHFKEAEIDETVEGSGRDVNPSSRSLSDKMVEEIDEGVTCDQRENIHDPASEQEGKESNARGSNASVTAAEDTNKSLETDILHFKSYSETDSNFKYVKDILEYSGFTRNEQAQMRYTVDQPIKPSLFTALEESLLHENEYSGDEITNICDRQLLFNLINEVLFQMYEKSPTYFPKPFAFNYKLKSMPKGNYLVNEVWNNVSSYLSLRPELDETLDDVVGRDLTKGTGWMNLQQEEECVALELEDMIIDDLLDEIIFSFV* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4683 690 MobiDBLite consensus disorder prediction 434 503 - -
Tpr7g4683 690 PANTHER PROTEIN TRM32 1 87 IPR044257 -
Tpr7g4683 690 PANTHER PROTEIN TRM32 86 688 IPR044257 -
Tpr7g4683 690 Pfam Domain of unknown function (DUF4378) 525 684 IPR025486 -
Tpr7g4683 690 MobiDBLite consensus disorder prediction 270 289 - -
Tpr7g4683 690 MobiDBLite consensus disorder prediction 459 486 - -
Tpr7g4683 690 MobiDBLite consensus disorder prediction 304 326 - -
Tpr7g4683 690 PANTHER PROTEIN TRM32 86 688 - -
Tpr7g4683 690 PANTHER PROTEIN TRM32 1 87 - -
Tpr7g4683 690 MobiDBLite consensus disorder prediction 487 503 - -
Tpr7g4683 690 MobiDBLite consensus disorder prediction 72 102 - -
Tpr7g4683 690 MobiDBLite consensus disorder prediction 75 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4683 Tpr-Chr7 55143751 55147825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4683 116 678 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 30.465 6.19e-50 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4683 - - mtr:MTR_2g096870 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4683 7 55143751 55147825 Tpr7g4683 7 55143751 55147825 ECH