Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4682 ATGAAGCTTTTGAACAACCCTTTTCCCTTTTCTTCTCAATCTCATATTCATTCACCCATCATGGAACAATCTTCTCCTGTTACTAACCCTAATCAAATTCATCTTGCGGTTGGTAAATCCCTTCACAAAACCACTACCTTACTTCAATGGACTTTCAATCAATTTAGGAACCAAGAAATTGTCTTGATTCATCTTTATAAACCTTCTCCTGTTATACCCACTTTATTGGGGAAAATGCCAGCTTCCCAAGCTAATCCTGAAGTGGTATCTGCTTTTAGAAGAGAGGAAAGAGAACAGACTGTGAGGTTTACTGATAAGTATTTGAGTATTTGCTATGCAGCTAAGGTGAAGGCAAGCGTTATTGTAGCGGAAACTGACCAAATCCAAAAAGGAATTGTTGATTTGGTTGTTAGTCATAATATTAGGAAGCTTGTCATTGGAGCGGAAACGGAAAATTTCATGAAAGTGAAAAGGAGTTCCGGGAAAGCAAATTACACTTTCAAACATGCTCCCCCGTTCTGTGAAATATGGTTTATATATAAAGGCAGACACATTTGGACAAGAGAGGCTTCTGAAACACTGTGTTCTTTGTCTTCACCTGCTCAAGCAGAGATTGCAACCACAGAAAGCTTGAGATGTAGATCTTTTCGATATGGTAAGAACGAATTACCCCATTTGGAAGATCTTCAACCAAATTCTGCTAGAACTGCAGTATGTTCTGAAATTAGAAGCTTGGATCTCGGTGAAATCATAGAAACCGAAGCCACTAATTCATCCAAATCATCCAGTTGCAGCAGTGATTGTTCTCCACAAAATTCGACTGCGGTTTATCTAGATGCATATTCAGAGGTCATGGAAGAAAGAATTAACAGTCAACTTATTGAAACCCAAAGAGAAGCTGAGGCAGCAACAGATGAATCATTTGCAGAACTAATAAAGTGCAGGAGGTCGGAAGCTGAAGCCGCGGAAGCCATGCAGAAAGTCAAATTGTTTGAATCTGCCCATGCGCATGAGGTGGAGCTCAGGAAAGAGGCTGAGGTTGCACTTAGAGATACCGTACTAGAACAACAAAAGCTCTTAGAAGAGAGTGAACGTATCTCGGGAGAGCTACAAATGACCATGAGAAATGTGGCCCTACTAGATAGCCGTGCTAAGGAAACAATCCGTAGGCGAGATGAAGCTGCACACGAGCTCTTGCTAATTCAAACATCCATATCAACCTTGTGGCAAGAAAGGCAGCAGATCAGGAGACAGAAAATGGAAGCCCTCCGCTGGCTTGAACGGTGGAAAAGTCGTGGACAAATCGGAGCAGCTCATTACAATGGAGTCATTGGGTTCGCTGAAGAACTGCCTGAGTTAGCAGAATTCTCTTTATCGGATATTGAAAATGCTACATGTAATTTTTCCGAGAGCTTTAAAATCGCACAAGGTGGATTTGGTTGTATATATAAGGGGGAGATGTTAGGTAGAACTGTTGCTATAAAGAAGTTCCATCAACAAAATGTGCAAGGACCAGCAGAGTTTCATCGAGAGGTTCAAATTCTTAGTAGTCTCCAACATCCTCATTTATTGACATTGCTTGGTGTTTGCCCTGAGGCCTGGTCAATTGTATATGAGTACCTCCCGAATGGAACTCTTCAAAACTACCTATTCCGAAAAAGTAACATTATCCCTTTGACATGGAATATCAGAACACGAATGATTGCCGAAATTTCCAGTGCACTTTGTTTCTTACATTCTTTTAAACCAGAAGCTATTATTCATGGTGATCTTAAGCCTGAGACTATACTTCTCGATTCTTCACTTAGTTGCAAGATATGCGAATTTAGGTTCAGTAGGCTTGGGACGGAGGAGTCTCTCTATAGTCCTAGTAGTAGTTTCCGCTTGAGCACTGAGCCAAAGGGTGCTTTCACATATACGGATCCCGAGTTTCAGCGAACCGGAGTACTAACAACCAAGTCTGACATCTACTCTTTTGGGCTTATTATTTTGCAACTCCTCACTGGTAGGACTCCAGTTGGATTAGCAGTTCTAGTTCGCCATGCAGTTTCATTTGGAAAATTGTCATCAATTCTTGATTCTTCAGCTGGAGAATGGCCTTTATCTGTAGCATCACGGTTGGTTGAACTCGGTTTGCAATGTTGTGCGCAAAATCGTAGAAGCAGACCAGAGTTAACACCTACTCTCGTGAGAGAATTGGAACAGCTACATGTTTCAGAAGAGAGACCCGTGCCATCTTTTTTCTTATGTCCAATCCTTCAGGAAATAATGCACGATCCTCAAATCGCAGCAGATGGATTTACATATGAAGGAGATGCCATACGTGAATGGTTGGAAAATGGGCATGATACGTCTCCGATGACTAATTTAAAATTGAATCACTTGCTTCTCACTCCCAATCACTCAATTAGACTTGCCATCCAAGATTGGCTTTGCAAATCATAA 2445 0.4131 MKLLNNPFPFSSQSHIHSPIMEQSSPVTNPNQIHLAVGKSLHKTTTLLQWTFNQFRNQEIVLIHLYKPSPVIPTLLGKMPASQANPEVVSAFRREEREQTVRFTDKYLSICYAAKVKASVIVAETDQIQKGIVDLVVSHNIRKLVIGAETENFMKVKRSSGKANYTFKHAPPFCEIWFIYKGRHIWTREASETLCSLSSPAQAEIATTESLRCRSFRYGKNELPHLEDLQPNSARTAVCSEIRSLDLGEIIETEATNSSKSSSCSSDCSPQNSTAVYLDAYSEVMEERINSQLIETQREAEAATDESFAELIKCRRSEAEAAEAMQKVKLFESAHAHEVELRKEAEVALRDTVLEQQKLLEESERISGELQMTMRNVALLDSRAKETIRRRDEAAHELLLIQTSISTLWQERQQIRRQKMEALRWLERWKSRGQIGAAHYNGVIGFAEELPELAEFSLSDIENATCNFSESFKIAQGGFGCIYKGEMLGRTVAIKKFHQQNVQGPAEFHREVQILSSLQHPHLLTLLGVCPEAWSIVYEYLPNGTLQNYLFRKSNIIPLTWNIRTRMIAEISSALCFLHSFKPEAIIHGDLKPETILLDSSLSCKICEFRFSRLGTEESLYSPSSSFRLSTEPKGAFTYTDPEFQRTGVLTTKSDIYSFGLIILQLLTGRTPVGLAVLVRHAVSFGKLSSILDSSAGEWPLSVASRLVELGLQCCAQNRRSRPELTPTLVRELEQLHVSEERPVPSFFLCPILQEIMHDPQIAADGFTYEGDAIREWLENGHDTSPMTNLKLNHLLLTPNHSIRLAIQDWLCKS* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4682 814 CDD STK_N 33 182 - -
Tpr7g4682 814 Gene3D Transferase(Phosphotransferase) domain 1 541 743 - -
Tpr7g4682 814 Gene3D Phosphorylase Kinase; domain 1 445 540 - -
Tpr7g4682 814 PANTHER OS02G0152300 PROTEIN 23 813 - -
Tpr7g4682 814 Pfam Protein tyrosine and serine/threonine kinase 473 726 IPR001245 GO:0004672|GO:0006468
Tpr7g4682 814 SUPERFAMILY RING/U-box 741 813 - -
Tpr7g4682 814 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 744 814 IPR013083 -
Tpr7g4682 814 ProSiteProfiles Protein kinase domain profile. 468 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4682 814 ProSiteProfiles U-box domain profile. 743 814 IPR003613 GO:0004842|GO:0016567
Tpr7g4682 814 SMART Ubox_2 747 810 IPR003613 GO:0004842|GO:0016567
Tpr7g4682 814 Pfam U-box domain 744 813 IPR003613 GO:0004842|GO:0016567
Tpr7g4682 814 SUPERFAMILY Protein kinase-like (PK-like) 452 730 IPR011009 -
Tpr7g4682 814 Gene3D HUPs 27 160 IPR014729 -
Tpr7g4682 814 PANTHER OS10G0100500 PROTEIN 23 813 - -
Tpr7g4682 814 Coils Coil 286 306 - -
Tpr7g4682 814 CDD RING-Ubox_WDSUB1_like 748 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4682 Tpr-Chr7 55134851 55139306 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4682 20 811 U-box Gene Family AT2G45910 35.775 3.02e-166 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr7g4682 PK_Tyr_Ser-Thr 6.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4682 - - gmx:100788846 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4682 7 55134851 55139306 Tpr7g4682 7 55134851 55139306 ECH