Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4678 ATGTTTTGGACATTTGAAAATCATTTTTTGGCTTTAAGTTGGAAGTTTAAGTTTTTGACAGAATATCTTGGTGAGCTAAGTTTATTGGAATATGAATGTTTGAAGTTCTTGCCTTCCTTTGTGGCTGCTTCTATCACATTGCTTGCTAAATTCATTGTTTGGCCTGAAAAACGTCCATGTTGGACATCAACACTAGAAGAATACTCTGAGTATAGCTCATTTGAGTTGAAAGAATGTGTTCTCATCTTACATGATTTGTATATGTCTAAAAGGGGAGCATGTTTTAAAGCTATTCGAAAGAAATATAGCCAACAAGAGGAGGAGCCTGATAATCCAGAGTTCGATCCCGAGTTGCAAAATGTGGCAAACCTTCCTTCGCCTTCTAAGTTACCAAGTTATTTGTTTGAAGTTGAAGTAGAGTTTCGACTAAAAAATAAGAAGTTGAAAGAAGAGTGA 456 0.3553 MFWTFENHFLALSWKFKFLTEYLGELSLLEYECLKFLPSFVAASITLLAKFIVWPEKRPCWTSTLEEYSEYSSFELKECVLILHDLYMSKRGACFKAIRKKYSQQEEEPDNPEFDPELQNVANLPSPSKLPSYLFEVEVEFRLKNKKLKEE* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4678 151 PANTHER CYCLINS 11 107 IPR039361 -
Tpr7g4678 151 SMART Cyclin_C_2 4 127 IPR004367 -
Tpr7g4678 151 SUPERFAMILY Cyclin-like 11 105 IPR036915 -
Tpr7g4678 151 Gene3D - 2 109 - -
Tpr7g4678 151 PANTHER CYCLIN-A3-1-RELATED 11 107 - -
Tpr7g4678 151 CDD CYCLIN 18 84 IPR013763 -
Tpr7g4678 151 Pfam Cyclin, C-terminal domain 8 106 IPR004367 -
Tpr7g4678 151 SMART cyclin_7 7 85 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4678 Tpr-Chr7 55114957 55116952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4678 4 136 Core Cell Cycle Gene Families AT5G43080 41.176 4.04e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4678 K06627 - gmx:100776007 122.094