Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4677 ATGGATTACATGAAGATACTTCAAAAAGACATTACTCCACATATGAGAGGACAATTGATTGATTGGTTAGCAGAACTTGCAGACAATTACAATCTTCTCCCTAATGTCATTTATCTTGCTGTTTCATATATCGATAGGTACCTATCTTTTCACCCTATAAGAAAGGTTAGGCTTCAATTGTTGGGTGTTACATCCATGTACATTGCATCGAAGTATGAAGATCTTAGCACACACAATGTGGAAACTTTCTCCGTAACTACATGTAATTATTATGACAAGGAAGAGGTTCTAGAGATGGAAAATAAAATACTCAAGACCCTAGATTTTGATCTGAGCAGCCCTACTATTATGACTTTTCTAGATTTATGTGATACAGGAAGTTTGAAGAAATTGCTTGTGAGGAAAATAATGTAA 414 0.3454 MDYMKILQKDITPHMRGQLIDWLAELADNYNLLPNVIYLAVSYIDRYLSFHPIRKVRLQLLGVTSMYIASKYEDLSTHNVETFSVTTCNYYDKEEVLEMENKILKTLDFDLSSPTIMTFLDLCDTGSLKKLLVRKIM* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4677 137 PANTHER CYCLINS 1 120 IPR039361 -
Tpr7g4677 137 ProSitePatterns Cyclins signature. 16 47 IPR006671 -
Tpr7g4677 137 Pfam Cyclin, N-terminal domain 2 112 IPR006671 -
Tpr7g4677 137 SMART cyclin_7 21 105 IPR013763 -
Tpr7g4677 137 Gene3D - 113 122 - -
Tpr7g4677 137 PANTHER CYCLIN-A1-1 1 120 - -
Tpr7g4677 137 SUPERFAMILY Cyclin-like 2 111 IPR036915 -
Tpr7g4677 137 CDD CYCLIN 15 104 IPR013763 -
Tpr7g4677 137 Gene3D - 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4677 Tpr-Chr7 55114061 55114924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4677 1 120 Core Cell Cycle Gene Families AT5G43080 55.000 3.90e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4677 K06627 - ini:109149307 140.969