Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4648 ATGAAGGGTATTAAAAAGGAAGAAACTAAATGTGCACAAATGACAATCTTTTATGACGGGAAAGTGATTGTGCTTGATGATATTCCAGATGAAAAAGCTAAAGACATTATGGTTTTTTCCACCGACAACTATGCTGCTTATCTATCATTTCTTCCAAGAAATTCTGTCAATATAGTAACTTGGATGTATAATATTTTAGAGGATATGCTTGATTTGTATCATAATGTTTTGTTGTTTTACTTTGTGTTTTTTGCATTCATGACTTTTGTTTTCATATTTTCAAATTTACCAATGACTAGGAAAGCTTCACTTCAGTGGTTCTTGGAGAAAAGGAAGAATAGGGCATCATATCAAACAACTTATCCAGTAGCAACCACTAATAAGAGAGTTGATGAATCATGGCATGGCTCTTCTTGA 417 0.3261 MKGIKKEETKCAQMTIFYDGKVIVLDDIPDEKAKDIMVFSTDNYAAYLSFLPRNSVNIVTWMYNILEDMLDLYHNVLLFYFVFFAFMTFVFIFSNLPMTRKASLQWFLEKRKNRASYQTTYPVATTNKRVDESWHGSS* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4648 138 ProSiteProfiles Tify domain profile. 7 42 IPR010399 -
Tpr7g4648 138 Pfam tify domain 12 37 IPR010399 -
Tpr7g4648 138 Pfam Jas motif 97 116 IPR018467 -
Tpr7g4648 138 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 125 IPR040390 -
Tpr7g4648 138 PANTHER PROTEIN TIFY 10A 6 125 - -
Tpr7g4648 138 SMART tify_2 7 42 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4648 Tpr-Chr7 54894912 54895795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4648 12 114 Tify Gene Family AT4G14720 37.736 2.31e-09 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tpr7g4648 tify 1.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4648 K13464 - oeu:111366098 65.855