Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4640 ATGAATGCACACTCCAATTCCAACAATATTATTCCATTCTCAACACCCTTTCTTCTTCCCTCTCAAGACCACTCTGTCCTCGAGTTCGACTCGCTCCACGACACTCTATCTCAAATCAACAACTCGGATTTGAGCAGTGGTTATAGCAGCTATGGTGGATCACCTTCACCAAGTACTCCTATCAGCTTGATGCAGAGGAGTATTAGTAGTCATTCCCTTCACCACAATAATGGGACTCGCCATCATCCCTTTTCTGCTTTTTTTGCTGAATTGCTCGAATCAGACAATACTCCGGTGAGGAAAGTTTGCAGTACCGGCGACCTGCAGAGGATTAATGGAATGCAACATAATCATCATCATGTGGATAGTCCACTGTCTAGTGAAAGTAGTATGATCATAGAAGGTATGAGCAGAGTTTGTCCATATAGCCCAGAAGAGAAGAAAGTCAGAATTGAAAGATACAAAACAAAGAGAAATCAGAGGAACTTCAACAAGAAAATTAAGTATGTTTGCAGGAAGACATTGGCAGACAGGAGGCCACGAATCAGAGGACGGTTTGCAAGGAATGATAAAATTGATAAGACCGCGAAAGTTGAGTGGAGCCACATTGGTGGTGGAGAGGAAGAGGATCAAGAAGATGAGAATTGGATCAATATCTTTGATTCCATAGTTGCTGCAAATCTTGATCATGATGAGTTTGAAGGCAGTTCCTCCTTTGGTCTATTGTATTAG 732 0.4208 MNAHSNSNNIIPFSTPFLLPSQDHSVLEFDSLHDTLSQINNSDLSSGYSSYGGSPSPSTPISLMQRSISSHSLHHNNGTRHHPFSAFFAELLESDNTPVRKVCSTGDLQRINGMQHNHHHVDSPLSSESSMIIEGMSRVCPYSPEEKKVRIERYKTKRNQRNFNKKIKYVCRKTLADRRPRIRGRFARNDKIDKTAKVEWSHIGGGEEEDQEDENWINIFDSIVAANLDHDEFEGSSSFGLLY* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4640 243 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 23 243 IPR045281 GO:0009909
Tpr7g4640 243 Pfam CCT motif 149 189 IPR010402 GO:0005515
Tpr7g4640 243 PANTHER CCT MOTIF PROTEIN 23 243 - -
Tpr7g4640 243 ProSiteProfiles CCT domain profile. 147 189 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4640 Tpr-Chr7 54806943 54809633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4640 143 203 C2C2-CO-like Transcription Factor Family AT5G15850 40.984 1.70e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g4640 CCT 2.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4640 - - gmx:100820236 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4640 7 54806943 54809633 Tpr7g4640 7 54806943 54809633 ECH