Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4635 ATGAATCTTCTGAAGAAATCTCCATCATCATCTTCATCAACATCATCATCAACAACAACAACAACGAGACCATCGTTTCCGAGGGATCCGCGCGGATCCCTCGAAGTATTCAATCCAACAAGCAACTCAAACTCACCAGTACGTTCTCCGTCCAACCTCAAAACTTGGACAGAAACCGAAGAACCACCAATAAGCGAATTCTCCGATGAAGTCACCATCACCAATACTTCATGGATGGCAATCAAGGAAGAAGAAAGTACCGGCAACGCCGCGCAGAGAGCAGCAGAGTGGGGGTTGGTACTAACAACAGATGCTGAGACTGGGAAACCACAAGGAGTGGCAGTTCGAAACTCCGGCGATGATGAACCTGGTGGAAAATTTGCTTCTAAAAGAAACTCCGGTAGAGCTTCCGGTGACTCTTCCGACGGTGGTGATGCACGTGGCGGGATACCGAGAGTTTCGGAGGATTTGAAAGATGCTTTATCGGCTTTTCAACAAACTTTTGTGGTTTCGGATGCTACCAAACCCGATTACCCGATTATGTATGCAAGTGCGGGTTTTTTCAAAATGACGGGTTATACTTCAAAAGAAGTCATAGGAAGAAACTGTCGGTTTTTACAGGGTGCAGATACAGATCCGAATGACGTGGCAAAAATAAGGGAAGCATTGGAAACTGGGAAAAGCTATTGTGGAAGGTTACTAAATTACAAGAAGGATGGAACTGCCTTTTGGAACCTTCTTACTATTTCACCCATCAAGGACAATGATGGCAATGTGCTCAAGTTAATTGGAATGTTGGTGGAGGTAAACAAACATACAGAGGGGTCCAAAGAGAAGAAGCTACGTCCAAATGGGTTGCCTGAATCTTTGATTCGATATGATGCTCGCCAGAAAGAGAAAGCTACATCTTCTGTATCTGAGTTACTACAAGCCATGAAACGTCCTCGTGCATTAAGTGAATCCGGACACCGTCCTTTTATCAGAAAATCAGGAGGAGGTTCTGAAGAAGACGAAGAAGTAGATAAAGCAGAACACAAATCAAGGAGAAATTCTGATAGTGTAGCTTCTTTTAGACTAAAATCACAAAGAAAAAGTAGAAGTTCAATGGAACGAATCAGTGAGCTACCTGAAAATCAACACAAAAACTCTCATCACCGTTCTTTCATGAGGTTCACGAGGAAAAGTCAGTCCATCGATGCAAACATCGATAGTAAAGAAATTGTATATGAAAGCTCTGAGAGTGACGATGATGAGAGGTCTGATAGTTTTGAATTTGATGACAAAGAAAAGCTGAGGGAAAAGCGAAAAGGTCTTGATCTTGCTACTACACTTGAGCGTATTGAGAAAAACTTTGTCATTACCGATCCAAGGCTTCCCGACAATCCCATAATCTTTGCATCTGATAGCTTCTTAGAACTTACGGAATATAGTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGACCAGAAACTGATCCAGCAACTGTGAAAAAAATTAGAGAAGCAATTGACAACCAAACAGAAGTTACTGTGCAACTGATCAATTACACAAGGACTGGGAAAAAATTCTGGAACTTGTTTCATTTGCAACCTATGCGTGATCATAAGGGAGAAGTGCAATATTTTATTGGTGTTCAACTTGATGGTAGTCAACATGTAGAGCCTCTTCATAACTGCATTAAAGAAGATACTGCAAAGGAGGGAGAAGAATTGGTAAAAAAAACTGCAGAAAATGTTGGTGAGGCAGTGAGAGAACTTCCAGATGCTAATCAGAAACCAGATGATTTATGGATGAATCATTCCAAAGTGGTTCACCCTAAACCTCATAGGAAGGACGATGTTCCTTGGAAAGCAATCCAAAAGATTACAGAAAGTGGCGAACAGATAAGCCTAAAGCACTTTAGGCCGATTAAACCTTTGGGATCTGGAGACACCGGAAGCGTGCATCTGGTGGAGCTTGAGGGAACTGGTCAGTACTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGCAATAAGGTGCATAGAGCTTGCACTGAGAGAGAAATTCTTGACATGTTGGACCACCCTTTTCTACCTGCATTATATGCTTCCTTTCAGACGAAAACACATGTTTGTTTGATAACCGATTACTATCCTGGTGGAGAACTATTCCTGCTTCTTGACCAACAACCAACAAAGGTTCTCAAGGAAGATGCTGTCAGATTTTATGCTGCTGAGGTACTAATTGCATTGGAGTACCTTCATTGTCAAGGCATAATTTATCGGGATTTGAAGCCAGAAAACGTGTTGATCCAAAGCAACGGGCATGTGTCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAGCCACAGCTTATTCTTCCAACTACAGAGGAAAAGAAGAAGAGGAAGAAAAAGAAGAAGAATGGACAACAAAAAAGTCCACAGGTTCCTATGTTTATGGCCGAACCAATGAGAGCGTCTAATTCTTTTGTTGGCACGGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGTCATACTAGTGCTGTAGATTGGTGGGCTCTAGGTATTCTTCTATATGAAATGCTTTATGGATATACACCATTTAGAGGAAAGACAAGACAAAAGACATTTGCAAATATTCTTCATAAAGATCTTAAATTTCCCAAAAGCAAACCGGTAAGTCCCCAGGCAAGGCAACTAATTTACCAGTTGTTGCATAGAGATCCCAAAAATAGATTGGGTTCACTTGAAGGAGCAAATGAAATTAAGAGTCATCTATTCTTCAAGAATGTCAATTGGGCTCTAATTCGTTGCATGAAACCTCCTGAGCTTGATGCTCCTATCTTACTGGAAAATGATGAAAATAGAGAAGCCAGAAATATTGACCCCGGCCTAGATGATTTACAAAAAAATATTTTCTGA 2934 0.4114 MNLLKKSPSSSSSTSSSTTTTTRPSFPRDPRGSLEVFNPTSNSNSPVRSPSNLKTWTETEEPPISEFSDEVTITNTSWMAIKEEESTGNAAQRAAEWGLVLTTDAETGKPQGVAVRNSGDDEPGGKFASKRNSGRASGDSSDGGDARGGIPRVSEDLKDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPNDVAKIREALETGKSYCGRLLNYKKDGTAFWNLLTISPIKDNDGNVLKLIGMLVEVNKHTEGSKEKKLRPNGLPESLIRYDARQKEKATSSVSELLQAMKRPRALSESGHRPFIRKSGGGSEEDEEVDKAEHKSRRNSDSVASFRLKSQRKSRSSMERISELPENQHKNSHHRSFMRFTRKSQSIDANIDSKEIVYESSESDDDERSDSFEFDDKEKLREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVKKIREAIDNQTEVTVQLINYTRTGKKFWNLFHLQPMRDHKGEVQYFIGVQLDGSQHVEPLHNCIKEDTAKEGEELVKKTAENVGEAVRELPDANQKPDDLWMNHSKVVHPKPHRKDDVPWKAIQKITESGEQISLKHFRPIKPLGSGDTGSVHLVELEGTGQYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYYPGGELFLLLDQQPTKVLKEDAVRFYAAEVLIALEYLHCQGIIYRDLKPENVLIQSNGHVSLTDFDLSCLTSCKPQLILPTTEEKKKRKKKKKNGQQKSPQVPMFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSPQARQLIYQLLHRDPKNRLGSLEGANEIKSHLFFKNVNWALIRCMKPPELDAPILLENDENREARNIDPGLDDLQKNIF* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4635 977 MobiDBLite consensus disorder prediction 104 147 - -
Tpr7g4635 977 SUPERFAMILY PYP-like sensor domain (PAS domain) 174 266 IPR035965 -
Tpr7g4635 977 TIGRFAM sensory_box: PAS domain S-box protein 180 273 IPR000014 -
Tpr7g4635 977 TIGRFAM sensory_box: PAS domain S-box protein 461 551 IPR000014 -
Tpr7g4635 977 ProSiteProfiles PAS repeat profile. 436 509 IPR000014 -
Tpr7g4635 977 SUPERFAMILY PYP-like sensor domain (PAS domain) 452 551 IPR035965 -
Tpr7g4635 977 Gene3D PAS domain 167 322 - -
Tpr7g4635 977 CDD PAS 180 269 IPR000014 -
Tpr7g4635 977 MobiDBLite consensus disorder prediction 1 27 - -
Tpr7g4635 977 ProSitePatterns Protein kinases ATP-binding region signature. 643 666 IPR017441 GO:0005524
Tpr7g4635 977 ProSiteProfiles PAC domain profile. 510 564 IPR000700 -
Tpr7g4635 977 MobiDBLite consensus disorder prediction 35 70 - -
Tpr7g4635 977 SMART pas_2 438 507 IPR000014 -
Tpr7g4635 977 SMART pas_2 155 224 IPR000014 -
Tpr7g4635 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 758 770 IPR008271 GO:0004672|GO:0006468
Tpr7g4635 977 MobiDBLite consensus disorder prediction 1 70 - -
Tpr7g4635 977 PANTHER FLIPPASE KINASE 1-RELATED 111 977 - -
Tpr7g4635 977 Gene3D Phosphorylase Kinase; domain 1 636 720 - -
Tpr7g4635 977 MobiDBLite consensus disorder prediction 363 384 - -
Tpr7g4635 977 SMART serkin_6 637 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4635 977 Gene3D Transferase(Phosphotransferase) domain 1 721 945 - -
Tpr7g4635 977 ProSiteProfiles Protein kinase domain profile. 637 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4635 977 Pfam Protein kinase domain 639 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g4635 977 SMART pac_2 230 272 IPR001610 -
Tpr7g4635 977 SMART pac_2 513 555 IPR001610 -
Tpr7g4635 977 Gene3D PAS domain 425 589 - -
Tpr7g4635 977 PANTHER PHOTOTROPIN-1 111 977 - -
Tpr7g4635 977 Pfam PAS domain 459 551 IPR000014 -
Tpr7g4635 977 Pfam PAS domain 174 269 IPR000014 -
Tpr7g4635 977 CDD STKc_phototropin_like 635 951 - -
Tpr7g4635 977 MobiDBLite consensus disorder prediction 313 395 - -
Tpr7g4635 977 MobiDBLite consensus disorder prediction 799 818 - -
Tpr7g4635 977 ProSiteProfiles PAC domain profile. 227 281 IPR000700 -
Tpr7g4635 977 MobiDBLite consensus disorder prediction 317 353 - -
Tpr7g4635 977 ProSiteProfiles PAS repeat profile. 153 224 IPR000014 -
Tpr7g4635 977 SUPERFAMILY Protein kinase-like (PK-like) 615 950 IPR011009 -
Tpr7g4635 977 CDD PAS 451 551 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4635 Tpr-Chr7 54754624 54766933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4635 8 977 AGC Kinase Gene Family AT3G45780 67.748 0.0 1326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr7g4635 Pkinase 5.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4635 K20715 - gmx:100817565 1479.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4635 7 54754624 54766933 Tpr7g4635 7 54754624 54766933 ECH