Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4619 ATGGCTAAGTTCATTGTGAGAAATAGTAACAAAAAGAAGAATGGGGGTAGCATTGTGAAACTCATTGAGAAACTACAAAAGAAAATCTTGCTAGGGAGAAATAAATCAACATCAACCTATGTGCCTGAGGATGTGAAAGAAGGACATTTTGCTGTGATAGCTGAGGATAGAAAAGAAGATCAAGAACCAAAGAGATTTGTGTTACCATTAAGTTGTTTAACAAATCCAACATTTGTTAGGTTATTGGAGCAAGCAGAAGAAGAGTATGGTTTTGATCATGAAGGTGCACTAACTATTCCTTGTAAGCCTAGTGAACTTCACAAGATGTTGCAACAATGGCAACAAGAAGAATACAATTCCTCCAATAACTACACGTTTTTTCAAAACTATTGA 393 0.3537 MAKFIVRNSNKKKNGGSIVKLIEKLQKKILLGRNKSTSTYVPEDVKEGHFAVIAEDRKEDQEPKRFVLPLSCLTNPTFVRLLEQAEEEYGFDHEGALTIPCKPSELHKMLQQWQQEEYNSSNNYTFFQNY* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4619 130 Pfam Auxin responsive protein 33 110 IPR003676 GO:0009733
Tpr7g4619 130 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 22 118 - -
Tpr7g4619 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 118 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4619 Tpr-Chr7 54619801 54620323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4619 42 102 Calmodulin-binding Proteins AT3G43120 50.820 1.21e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4619 - K14488 gmx:100794278 148.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4619 7 54619801 54620323 Tpr7g4619 7 54619801 54620323 ECH