Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr7g4602 | ATGGCTGCATATTGTTCTGAGCTTCAGTTTTTAGCTAATCCTGTTACTAATCATGTTCAAAGTGCAGAACAGCATAATCAAGATATTAATTCACTTGGATTAATCTCAGCTAGGAAAACAGCAGAAGCTGTTGAGATATTAAAGCTTATGGCTTCAACTTATTTGATTGCTTTATGTCAAGCAATAGATTTGAGGTATTTGGAGGAGAATTTAAAGAGTACAGTTAAGAATACAATGAGTCAAGTGGCTAGAAAAATCTTAAATGTTGGAGTCAATGGTGAGATTCATCATTGCATGTTTAGTGAGAAAAATTTGATTAAAGTGGTTGATTGTGAGTATGTTTTTGCATATATTGATGATCCTTATAATGACACATATCCACTTATGCAAAAATTGAGGCAAGTGCTTATGGAACATGCATTGAAGAGTGGTAAAAATAATGATTTGAAAAGTTTAAATGCTTCTATTTTCCTTAAGATAGGTGCATTTGAGGAGGAACTAAAAAGGGTGTTGCCAAAAGAGGTTGAATCTACAAGAAGTGCTTTTGAAAAAGGAATTTTGGCAAGTCCTAACAAAATCAAGAAATGCAGGTCTTATCCATTGTATAAGTTTATTAGAGAGGAATTGGAGACTGAGTTTTTAACTGGTGAGAAAGTTAAATCACCAGGAGAAGATTTTGATAAAGTTTTTAATGCAATTAATCTTGGAAAGATAATAGATCCAATGTTTGAATGCCTCAAGGATTGGGATGGTACTCCACTTCCTATATAA | 771 | 0.3294 | MAAYCSELQFLANPVTNHVQSAEQHNQDINSLGLISARKTAEAVEILKLMASTYLIALCQAIDLRYLEENLKSTVKNTMSQVARKILNVGVNGEIHHCMFSEKNLIKVVDCEYVFAYIDDPYNDTYPLMQKLRQVLMEHALKSGKNNDLKSLNASIFLKIGAFEEELKRVLPKEVESTRSAFEKGILASPNKIKKCRSYPLYKFIREELETEFLTGEKVKSPGEDFDKVFNAINLGKIIDPMFECLKDWDGTPLPI* | 257 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr7g4602 | 256 | PANTHER | HISTIDINE AMMONIA-LYASE | 1 | 256 | IPR001106 | - | |
| Tpr7g4602 | 256 | PANTHER | AMMONIA-LYASE, PUTATIVE-RELATED | 1 | 256 | - | - | |
| Tpr7g4602 | 256 | Pfam | Aromatic amino acid lyase | 1 | 77 | IPR001106 | - | |
| Tpr7g4602 | 256 | Gene3D | Fumarase/aspartase (Central domain) | 133 | 256 | - | - | |
| Tpr7g4602 | 256 | Gene3D | Fumarase/aspartase (Central domain) | 1 | 132 | - | - | |
| Tpr7g4602 | 256 | SUPERFAMILY | L-aspartase-like | 1 | 256 | IPR008948 | GO:0003824 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr7g4602 | Tpr-Chr7 | 54459945 | 54461279 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr7g4602 | 1 | 256 | Monolignol Biosynthesis Gene Families | AT2G37040 | 69.141 | 9.83e-130 | 382 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr7g4602 | K10775 | - | cit:102619342 | 396.356 |