Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4600 ATGTGTTGCGGTGGCCGCGAAATTGAGGTGGTGAGGGTGGGAGGGGAGAAATTGAGGGTGGGGGAGGTGGCTGCGGTGGCCGGGAGGATGGCGGCGGTAGAGCTGAATGAGGGGGCAAGGGTTAGAGTTAAGGAGAGTAGTGAATGGGTGATGGAGAGTGTTCATAAGGGTACTGATTGTTATGGTGTCACTACTGGCTTTGGTTCAACCTCTCATAGAAGAACTACTCAAGGTCATGCCCTTAAAACTGAGCTTATTAGGTTTCTGAATGCTGGAATATTTGGAAATGGAACAGAACCATGTCATACATTACCACACAATGCAACAAGAGCTGCAATTCTAGTAAGAATCAACACACTTCTTCAAGGCTACTCAGGAATCAGATATGAAATACTAGAAGCCATTGCAAAACTTGTCAACCACAACATTACACCATGTTTACCGTTGCGTGGATCAATTTCCGCCTCAGGTGACTTAATATGCCTTATTAATTGTATACGCACATTATTCTGGATTGGTTTATGCCTAATTTATTGA 537 0.4451 MCCGGREIEVVRVGGEKLRVGEVAAVAGRMAAVELNEGARVRVKESSEWVMESVHKGTDCYGVTTGFGSTSHRRTTQGHALKTELIRFLNAGIFGNGTEPCHTLPHNATRAAILVRINTLLQGYSGIRYEILEAIAKLVNHNITPCLPLRGSISASGDLICLINCIRTLFWIGLCLIY* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4600 178 Pfam Aromatic amino acid lyase 18 164 IPR001106 -
Tpr7g4600 178 Gene3D - 4 171 IPR024083 -
Tpr7g4600 178 PANTHER HISTIDINE AMMONIA-LYASE 9 162 IPR001106 -
Tpr7g4600 178 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 9 162 - -
Tpr7g4600 178 SUPERFAMILY L-aspartase-like 9 162 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4600 Tpr-Chr7 54447046 54448251 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4600 10 162 Monolignol Biosynthesis Gene Families AT3G53260 70.323 8.22e-71 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4600 K10775 - egr:104454225 236.113