Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4596 ATGTTACGGCGTGACGAGGATCCATTAAAGTGGGAAGAGGCGGCGGAGTCATTGAAGGGGAGCCATTTTGAGGAAGTGAAGAGGATGGTGGAGGATTATAGGAAGGAGGTGGTGAGGATGGGAGGGGAGAAATTGAGGGTGGGGGAGGTGGCTGCGGTGGCCGGGAGGATGGCCGCGGTGGAGCTGAATGAGGGTGCAAGGGTTAGAGTCAAGGAGAGTAGTGAATGGGTGATGGAGAGTGTTCATAAGGGTACTGATTGTTATGGTGTCACTACTGGCTTTGGTTCAACCTCTCATAGAAGAACTACTCAAGGTCATGCCCTTCAAACTGAGCTTATTAGGTTTCTGAATGCTGGAATATTTGGAAATGGAACAGAACCATGTCATACATTACCACACAATGCAACAAGAGCTACAATTCTAGTAAGAATCAACACACTTCTTCAAGGCTACTCAGGAATCAGATATGAAATACTAGAAGCCATTGCAAAACTTGTCAACCACAACATTACACCATGTTTACCGTTGCGTGGATCAATTTCCGCCTCAGTGCAATTACAGGGAATTTATCCAAAAAAGAAAAGGTGCAATTACAGGAGGTTGAGAGGCGGCCGATGTATGGTGACGGTTGCAGGACGGAGGTGCACGGCGGAGCTCACCAATTCCACATAG 672 0.4762 MLRRDEDPLKWEEAAESLKGSHFEEVKRMVEDYRKEVVRMGGEKLRVGEVAAVAGRMAAVELNEGARVRVKESSEWVMESVHKGTDCYGVTTGFGSTSHRRTTQGHALQTELIRFLNAGIFGNGTEPCHTLPHNATRATILVRINTLLQGYSGIRYEILEAIAKLVNHNITPCLPLRGSISASVQLQGIYPKKKRCNYRRLRGGRCMVTVAGRRCTAELTNST* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4596 223 SUPERFAMILY L-aspartase-like 6 183 IPR008948 GO:0003824
Tpr7g4596 223 Gene3D - 2 187 IPR024083 -
Tpr7g4596 223 Pfam Aromatic amino acid lyase 45 184 IPR001106 -
Tpr7g4596 223 PANTHER HISTIDINE AMMONIA-LYASE 6 186 IPR001106 -
Tpr7g4596 223 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 6 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4596 Tpr-Chr7 54421292 54425661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4596 7 186 Monolignol Biosynthesis Gene Families AT3G53260 68.132 4.79e-83 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4596 K10775 - vvi:100233012 272.322