Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4590 ATGTATCATAAAGAGAATCAAAACATGGAGATAAGTCCTTACAATACTTCAAAGAAAAAAACACACATGAAGAAGTTGAACCATCAAAACAATAATTTTATTGTTCAAGAAGCTTCAACAATAGACATGATGCATACATCATCAAGCAATAATCATCAAACATCTTCAGATTCAAGTGAGACATGTCATCATGATCAAGATGGTAAATGGTCTTCTAAACTTCTCAAAGAGTGTGCAATAGCAATATCTAATAGAGATTCATCCAAAATTCATCATCTTCTTTGGATGTTAAATGAGTTATCTTCACCTTATGGAGATATTGATCAAAAACTAGCTTCATATTTTCTACAAGCTCTTTTTTCTAAGGCAACACAATCTGGTCAAAAGTGTTACAAAACTCTTTCATCAATTGCTCACAAGAACCATTCTTTTGATTCATCAAGAAAATTAATACTCAAGTTTCAAGAGGTAAGTCCTTGGACAACTTTTGGACATGTAGCATCAAATGGTGCTATTTTAGAAGCTTTAGAAGGAGAGAAAAAACTTCACATAATTGATATTAGTAACACACTTTGTACTCAATGGCCTACTCTTCTAGAAGCTTTAGCTACAAGAAATGATGAAACACCTCACCTTAAACTCACAATTGTTGTCACAAATAATATTTCTAGTGTTATTGTCATGAAAGAAGTTGGTCAAAGAATGGAGAAATTTGCTAGGTTAATGGGAGTACCTTTTGAATTAAATGTTATTAGTGGTTTGAAACATTTAAGGGAGTTAACAAAAGAAAGATTAGGAGTTCAAGAAGATGAAGCAATAGCTTTGAATTGTGTTGGAGCATTAAGAAGAGTTGAAGTTGAAGAAAGAGAAAATTTGATTCAATTTTTCAAATCTCTTAATCCTAGAGTTGTTACATTTGTTGAGGAAGAAGGTGATTTTATTAGTAATGATTTTGTTAAATGTTTTGAAGAGTGTCTTAAATTTTACACAATTTATTTTGATATGTTGGAAGAGAGTTTTGCACCAACAAGTAATGAGAAATTGATGTTAGAAAGAGAGTGTTCAAGAAGCATAGTTAGGGTTTTGGCTTGTGATCACGAATTCGACGATAACGATGATGATGAAGATGGTGGTGATGATTGTGAGAAAAGAGAAAAAGGAACACAATGGTTTGAAAGGCTTAAGAATGAATTTTCACCTAGTGGGTTTAGTGATGATGTTGTGGATGATGTCAAAGCTTTGCTAAAAAGATATCAAAGTGGTTGGTCACTTATTGTGCCTCAAGGAGATGATAATCAAAAAGGAATTTATCTAAAATGGAAGGAGGAAGTAGTTGTTTGGGCATCAACATGGAAACCCTAG 1362 0.3253 MYHKENQNMEISPYNTSKKKTHMKKLNHQNNNFIVQEASTIDMMHTSSSNNHQTSSDSSETCHHDQDGKWSSKLLKECAIAISNRDSSKIHHLLWMLNELSSPYGDIDQKLASYFLQALFSKATQSGQKCYKTLSSIAHKNHSFDSSRKLILKFQEVSPWTTFGHVASNGAILEALEGEKKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTIVVTNNISSVIVMKEVGQRMEKFARLMGVPFELNVISGLKHLRELTKERLGVQEDEAIALNCVGALRRVEVEERENLIQFFKSLNPRVVTFVEEEGDFISNDFVKCFEECLKFYTIYFDMLEESFAPTSNEKLMLERECSRSIVRVLACDHEFDDNDDDEDGGDDCEKREKGTQWFERLKNEFSPSGFSDDVVDDVKALLKRYQSGWSLIVPQGDDNQKGIYLKWKEEVVVWASTWKP* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4590 453 Pfam GRAS domain family 73 452 IPR005202 -
Tpr7g4590 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 44 452 IPR005202 -
Tpr7g4590 453 ProSiteProfiles GRAS family profile. 62 452 IPR005202 -
Tpr7g4590 453 PANTHER PROTEIN SHORT-ROOT-LIKE 44 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4590 Tpr-Chr7 54355608 54357357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4590 67 453 GRAS Transcription Factor Family AT4G37650 50.493 4.83e-140 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr7g4590 GRAS 3.1e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4590 - - gmx:100818806 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2231 5 43328726 43330885 Tpr7g4590 7 54355608 54357357 PCT