Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4580 ATGGAGTTTGAGATTGATGATAACACCAATGGTGAGCCAGTAGGAAATGCTACTATGGGAGAGGTTAGTAGCAGCATAGCTGACAAAGACATAGTCGACTGTAGTTCTTTGGATCCAACTGATGAACAGGATCAAGATGATAATATGACTCAAGATTCTTCTGGAGCCGACCAAATACCATCACCAGCTCCATTATCGGTTGTGAGAATCGAGGAACCCTATTTGGGTCAGGAGTTTGTATCGGAAGCCGAAGCCCATGCATTTTATAATGCATATGCTACGCGTGTTGGATTTGTCATACGTGTAAGTAAGCTCTCGAGGTCAAGGCGTGATGGATCTGTTATTGGACGGGCTCTTGTTTGTAACAAAGAAGGTTTCAGAATGCCTGACAAGCGGGAAAAGATTGTAAGGCAAAGGGCAGAAACAAGGGTTGGTTGCAGGGCAATGATAATGGTGAGGAAATTAAATTCTGGTTTGTGGTCTATAACAAAGTTTGTAAAGGAGCACACACATCCTCTGACACCTGGAAGAGGCAGACGTGACTTCGTTTATGAGCAATATCCGAGTGGACATGACAGAGTTCGAGAACTAACTCAGCAGTTGGACCTAGAGAAAAAGCGAACTGAAACCTATAAAAGGAATCTTGAATTGTTATATGAGTACATCGAAGAGCATAATGAAACTGTTTCAAAGCAGATACAGCAAATAGTAGAGAGTGTGAAGGAGGTGGAAGCCAAAGAACAAGAGAATCCTAGATAG 759 0.4256 MEFEIDDNTNGEPVGNATMGEVSSSIADKDIVDCSSLDPTDEQDQDDNMTQDSSGADQIPSPAPLSVVRIEEPYLGQEFVSEAEAHAFYNAYATRVGFVIRVSKLSRSRRDGSVIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMIMVRKLNSGLWSITKFVKEHTHPLTPGRGRRDFVYEQYPSGHDRVRELTQQLDLEKKRTETYKRNLELLYEYIEEHNETVSKQIQQIVESVKEVEAKEQENPR* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4580 252 Coils Coil 194 214 - -
Tpr7g4580 252 Coils Coil 226 246 - -
Tpr7g4580 252 Pfam FAR1 DNA-binding domain 88 174 IPR004330 -
Tpr7g4580 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 250 - -
Tpr7g4580 252 MobiDBLite consensus disorder prediction 1 61 - -
Tpr7g4580 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4580 Tpr-Chr7 54275885 54279381 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g4580 FAR1 2e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4580 - - gmx:100806900 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4580 7 54275885 54279381 Tpr3g2203 3 20641202 20646218 PCT