Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4573 ATGATGGATCACCAATCTGGCCAGGGATTTGATTCATATGGCAGTGACCCTAACGTGATAGCAGAAACCAGTGAGAAACATGACAAAGTAGACGTCCACATTTCAAACAACTTAGAATTATGTGCAGGTGAAGATGAAAGGTTTGTTGAACAACCTGTGGCAGATTCAGACACTATAGAACCATTCATAGGTATGGAGTTCAACTCAAGGGAGGAAGCCAGAGAGTTCTACAATGCCTATGGTAGACGGATTGGATTTACAGTACGAGTACACCATAACCGCCGTTCACGAATTAATAAAGAGGTTATCGGTCAAGATTTTGTTTGCTCAAAAGAAGGCTTTCGAGCAAAGAAGTATGTGCACAGAAAAGATAGAGTGCTCCCTCCTCCACCACCCACCCGAGAAGGTTGTCAAGCCATGGTAAGGATGACTTTAACAGATGGAGGGAAGTGGGTTGTCGCCAAATTTGTGAAGGAGCATACACATAAACTGATGAGTCCTAGTGAAGTTCCATGGCGAAGATCTGAGAAGCACTTGATTAGTGAGGATGAGAAAGATAGGAGAATCCGTGCGCTATCACTTGAGTTGTACAACGAAAGGCAAAAGTACAAACGACGTTGTGCAGCATATGAAGAACAAATAAATATGATTCTGAATGATGTGGAAAGGCACACAGAACACATCTCTAAAAAAGTTGCTGATGTAGTTCGAAATATAAGAGAGATTGAGGAAGACAAATCAGAGTCAAATGGAAGGTAA 759 0.419 MMDHQSGQGFDSYGSDPNVIAETSEKHDKVDVHISNNLELCAGEDERFVEQPVADSDTIEPFIGMEFNSREEAREFYNAYGRRIGFTVRVHHNRRSRINKEVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPPTREGCQAMVRMTLTDGGKWVVAKFVKEHTHKLMSPSEVPWRRSEKHLISEDEKDRRIRALSLELYNERQKYKRRCAAYEEQINMILNDVERHTEHISKKVADVVRNIREIEEDKSESNGR* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4573 252 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 2 251 - -
Tpr7g4573 252 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Tpr7g4573 252 Coils Coil 193 220 - -
Tpr7g4573 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4573 Tpr-Chr7 54212255 54215408 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g4573 FAR1 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4573 - - gmx:100810283 409.068