Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4554 ATGGACACCAAATCAAAAGGGAAACACAAGGGGAAGCAGAAGGAAGAAAGAAGCAACCGTCGTGTTCTTGGAGATATCGGTAATCTTGAGGGGAATCAGGTTTCAAGACCCATCACAAGGAATTTCCATAAAAAATTATTGGAAAAAGCAGAAGCTGCAGCTAACTCGGCACCAGAATTAGAAGTTCCGGCTAATTGTGACCAAGGAGCTACACTAAGGAATCAAAATGTTGGTGATGATTGTGCTCAAAAGCCAAATCCTGAGGCTGTACATGTCGACAGTTCTGAAGCAGGAGAAAAACTTGATTTAGTTCCTAAAAAAGAGGGCAGTGGAAGATCTTCTAGGGAGGACCCGATTCTGAATTCGCCACTTACTACATTAAGCAAGCCAAATCCCGAGGCTGTAGATGTCGATAGTTCTGAAGCTGGAGAAAAACTTGATTCAGTTCCTAAAAAAGAGGGCAGCGGAAAATCTGCTAGGGAGGACCAGATTCCGAATTCGCCACCTACTACAAAAAGCAAGATTGCTCGCAGAATCTTGATTGAGCCCGAGGATCAGCCTGTTGACATGGATGCAGATGATGATACTAATAATTTAGCAGCAGATGAATATCTTGATGAACTATACAATTTCTACAAGCTAACAGAAGAAGAAAATCGAGCTTCAGACTACATGGAATCACAGAAGGAAATCAATACTAAGATGAGGACTATTGTCGTGGACTGGTTGGTTGAAGTTCATCGTCATTTTAAATTGAAGACAGAGACACTCTTTCTTAACATTAACATAATTGATAGATACCTCTCATTGATTAATGTACCAAAAAAAGAGCTACAGTTAGTGGCAATATGTTCAATGTCCTTAGCTTGCAAATATGAAGAAGTGTCATATCCTAAGGTAAATGATTTGTTGGAGATATCAGATAAATTTTATAACAGACGCCAGTTTATTTCGAGGGAGAGAGATATTGTTGAAAAGCTTCAATGGAATTTTACAGTAACTACACCCTATGTGTTTTTAGTTCGACTTATTAGAGCGTCTATTGTTCAAGATAAAGAGATGGAGAACATGGCATTTTACCTAGCAGAACTTGGACTTGGAAATTATTATGTCATGGTATTATTCTCGCCTTCACAGATTGCTGCAGCAGCTGTTTACTCGGCTCGTTGTATACTCAATAGGATTCAATATTGGAATCAATATCTGCAGAACCTAGCTGGTTACTGCATAGAACAAATCAAAGATTGCGCGAAGCTATTAGTGAGGATATACGCAAGTGCAGCAGATGTTAAAACCAAATCAGTGTACAACAAATTCTCAAGTCCTAGGAAAGGTCACATTGCTCTTTTACCACAGCCGCGTAACATCGAAGAAAGATTGTAG 1383 0.3941 MDTKSKGKHKGKQKEERSNRRVLGDIGNLEGNQVSRPITRNFHKKLLEKAEAAANSAPELEVPANCDQGATLRNQNVGDDCAQKPNPEAVHVDSSEAGEKLDLVPKKEGSGRSSREDPILNSPLTTLSKPNPEAVDVDSSEAGEKLDSVPKKEGSGKSAREDQIPNSPPTTKSKIARRILIEPEDQPVDMDADDDTNNLAADEYLDELYNFYKLTEEENRASDYMESQKEINTKMRTIVVDWLVEVHRHFKLKTETLFLNINIIDRYLSLINVPKKELQLVAICSMSLACKYEEVSYPKVNDLLEISDKFYNRRQFISRERDIVEKLQWNFTVTTPYVFLVRLIRASIVQDKEMENMAFYLAELGLGNYYVMVLFSPSQIAAAAVYSARCILNRIQYWNQYLQNLAGYCIEQIKDCAKLLVRIYASAADVKTKSVYNKFSSPRKGHIALLPQPRNIEERL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4554 460 Pfam Cyclin, C-terminal domain 335 452 IPR004367 -
Tpr7g4554 460 Gene3D - 221 326 - -
Tpr7g4554 460 MobiDBLite consensus disorder prediction 115 133 - -
Tpr7g4554 460 CDD CYCLIN 235 324 IPR013763 -
Tpr7g4554 460 SMART Cyclin_C_2 334 453 IPR004367 -
Tpr7g4554 460 CDD CYCLIN 332 421 IPR013763 -
Tpr7g4554 460 SMART cyclin_7 241 325 IPR013763 -
Tpr7g4554 460 SMART cyclin_7 338 422 IPR013763 -
Tpr7g4554 460 PANTHER CYCLINS 14 453 IPR039361 -
Tpr7g4554 460 PANTHER CYCLIN-B1-4 14 453 - -
Tpr7g4554 460 SUPERFAMILY Cyclin-like 335 454 IPR036915 -
Tpr7g4554 460 MobiDBLite consensus disorder prediction 138 159 - -
Tpr7g4554 460 MobiDBLite consensus disorder prediction 77 176 - -
Tpr7g4554 460 PIRSF Cyclin_A_B_D_E 1 459 IPR039361 -
Tpr7g4554 460 Pfam Cyclin, N-terminal domain 209 331 IPR006671 -
Tpr7g4554 460 Gene3D - 327 459 - -
Tpr7g4554 460 MobiDBLite consensus disorder prediction 1 39 - -
Tpr7g4554 460 MobiDBLite consensus disorder prediction 93 114 - -
Tpr7g4554 460 SUPERFAMILY Cyclin-like 197 331 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4554 Tpr-Chr7 54047232 54053557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4554 184 451 Core Cell Cycle Gene Families AT2G26760 47.388 3.76e-88 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4554 K21777 - jre:109013760 350.517