Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4551 ATGGAGTCAGATCTTCATCAACAACAACAACAACCACAGGTAAATTCATCAGGTTTAACACGTTTCAAATCAGCACCAAGTTCATATTTCAACAACATAATTGATAAAGAATTTTATGAGCATGTTTTCAATCGACCTTCAAGTCCAGAAACAGAACGAGTTTTTTCAAGGTTTATGAATAGTTTAGGTTCAGAAGAAGATTTACTTACTCCAAAAATTTCAGCTGAATCTACTGTTAAAGAAGAAGAAGTTATGGCTTCAATCAACAATGAACAAGTTGTTCATCAACAGAGTAATATGAATATGAATATGAATAATAATTATAATAACTCTGTTGTTACTTCTTCTCATGGTTTTTATCAAAGTTCAGTTATGCCACCTTTGCCAAATCAAAATGTTTCTTCTGGTTTGGATGGAAATTTTTCAATGGGAGTTAATCAGTTGCAACAAGTGAAGAATCATGGTGGAAATAATTCTAATCTTATTAGACATAGTAGTTCACCAGCTGGATTATTTTCTCAAATTAACATTGAAAATGGGTATGTTAGTATGAGAGGAATGGGAACAATAGGAGCTATGAATAACTCAATAAAAGAAGCAAAATTTTCTAATGCAAGGAGTTTGAAGAATTCAACAAACTATTCATCAGGGATAATGTCAACAATAGCTGAAATTGGTGACAAAGATAATAGAGAAAATAATCAAGAAAGTGAAGCTTATGGTGAAAGTCATGGTAATGAGTATATGGATTATCAAGTTGATACTTGGGATGATTCTGAAATGATGTCTGAAAATGTTGGTGGTTTAAAAAGATTTAGAGATAATGATTCAAAACAACATTTTTCTGGTTTAAATGCAGCTGCACTTCAGAATGAAACACGAGGAGGACATTCTTCATCTCCTTTGGCTCATCAATTGAGTATGCCAAATACTTCATCTGAAATGGCAGCTATGGAGAATTTTCTACATTTCTCTGATTCTGTTCCGATGAAAATTCGTGCTAAGCGAGGTTGTGCCACTCACCCTAGAAGCATAGCAGAAAGGGTTAGAAGGACTAAAATTAGTGAACGTATGAGGAAGCTACAAGATCTGGTCCCAAACATGGATAAGCAAACAAACACAGCAGATATGTTGGACTTGGCTGTAGATTACATCAAAGACCTTCAAAAGCAAGCTGAGGTATTTCAAAAAAAAATTAATCCTCAACTATGTCAATATCTTATAATTATGGATTATTACCTAATTAATTTTCTTCCAACATTATGTATATGTATATACACTTTTATAGAAGCTTCAAGATTGTCAAGCAAAGTGTACCTGTCCACACAAGCAACAACAATAACGGCAAAGTGA 1353 0.3326 MESDLHQQQQQPQVNSSGLTRFKSAPSSYFNNIIDKEFYEHVFNRPSSPETERVFSRFMNSLGSEEDLLTPKISAESTVKEEEVMASINNEQVVHQQSNMNMNMNNNYNNSVVTSSHGFYQSSVMPPLPNQNVSSGLDGNFSMGVNQLQQVKNHGGNNSNLIRHSSSPAGLFSQINIENGYVSMRGMGTIGAMNNSIKEAKFSNARSLKNSTNYSSGIMSTIAEIGDKDNRENNQESEAYGESHGNEYMDYQVDTWDDSEMMSENVGGLKRFRDNDSKQHFSGLNAAALQNETRGGHSSSPLAHQLSMPNTSSEMAAMENFLHFSDSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQAEVFQKKINPQLCQYLIIMDYYLINFLPTLCICIYTFIEASRLSSKVYLSTQATTITAK* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4551 450 Pfam Helix-loop-helix DNA-binding domain 343 389 IPR011598 GO:0046983
Tpr7g4551 450 SMART finulus 344 394 IPR011598 GO:0046983
Tpr7g4551 450 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g4551 450 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 393 - -
Tpr7g4551 450 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 7 393 - -
Tpr7g4551 450 Gene3D - 339 406 IPR036638 GO:0046983
Tpr7g4551 450 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 338 388 IPR011598 GO:0046983
Tpr7g4551 450 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 341 398 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4551 Tpr-Chr7 54018176 54021603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4551 12 411 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 36.730 3.35e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g4551 HLH 6.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4551 - - gmx:100805812 490.73